Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0153 ATGACCATGGCCATGCCTCTGTTTCCGATCCTCTTCCTTCTGTACTTAGCTTCCTCGGTGGCATCATCGGATCTCCGACCTGGGTTTTACTCAAAAACATGCCCTCAAGCTGAACTCATAGTCCGAGATGTCATGAAGAAGGCCCTCGTGAGGGAACCCAGAAGTGTTGCCTCTGTTATGCGCTTCCAGTTCCATGATTGCCTTGTCAACGGGTGTGATGCTTCTATGTTGCTTGATGACACACCAACCATGCTTGGGGAGAAACTGGCCCTCTCAAATATAAATTCTCTTAGATCATTTGAGGTTGTTGATGAAGTGAAGGAAGCGCTCGAGAAGGCGTGCCCCGGAGTTGTTTCCTGTGCTGACATCATAATTATGGCATCTAGAGATGCTGTTGCTCTGACTGGTGGACCCGACTGGGAAGTGAGGTTGGGAAGATTGGACAGCTTGACTGCTAGTCAAGAAGACTCGAACAATATCATGCCCAGCCCAAGAGCCAACGCGAGCTCTCTTCTTGATCTCTTCCAACAATTTAACCTTAGTGTGAAAGACCTCGTAGCACTCTCAGGATCTCACTCTATCGGCCAAGGTCGTTGTTTTTCCATCATGTTTAGGCTATACAATCAATCTGGAACTGGAAGGCCTGACCCTGCCATTGACCCTATCTATAGAGAAGAGCTTGACAAGCTATGTCCACTAGATGTTGACCAAAATGTGACAGGGAACCTTGATTCCACGCCTCAGGTGTTTGATAACCAATATTTCAAGGACTTGGTCGCTGGGAGGGGGTTTCTCAACTCTGATCAAACGCTCTCCACATTCCCCCAGACAAGGGAGTTTGTGAGGTTATTTAGCAGACATCAAAGTGAGTTTTTCAAAGCATTTGAGGAAGGAATGTTGAAACTGGGTGACTTGCAGTCTGGTCGGCCTGGGGAAGTTAGGACAAACTGCAGGGTGGTCAATGGTCGCCCGGCTCATTTGCTGCTTGAGTCTCAACACAAGATGGAGaataacaataaatcaatataa 1029 0.4713 MTMAMPLFPILFLLYLASSVASSDLRPGFYSKTCPQAELIVRDVMKKALVREPRSVASVMRFQFHDCLVNGCDASMLLDDTPTMLGEKLALSNINSLRSFEVVDEVKEALEKACPGVVSCADIIIMASRDAVALTGGPDWEVRLGRLDSLTASQEDSNNIMPSPRANASSLLDLFQQFNLSVKDLVALSGSHSIGQGRCFSIMFRLYNQSGTGRPDPAIDPIYREELDKLCPLDVDQNVTGNLDSTPQVFDNQYFKDLVAGRGFLNSDQTLSTFPQTREFVRLFSRHQSEFFKAFEEGMLKLGDLQSGRPGEVRTNCRVVNGRPAHLLLESQHKMENNNKSI 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0153 342 Gene3D Peroxidase, domain 2 162 302 - -
Ssu2g0153 342 PANTHER PEROXIDASE 72-RELATED 10 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0153 342 CDD secretory_peroxidase 25 320 IPR033905 GO:0004601|GO:0042744
Ssu2g0153 342 PANTHER PEROXIDASE 17 10 323 - -
Ssu2g0153 342 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0153 342 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0153 342 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0153 342 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0153 342 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0153 342 Pfam Peroxidase 41 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0153 342 ProSiteProfiles Plant heme peroxidase family profile. 24 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0153 342 Gene3D - 28 321 - -
Ssu2g0153 342 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Ssu2g0153 342 SUPERFAMILY Heme-dependent peroxidases 25 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu2g0153 342 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0153 342 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0153 342 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0153 342 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0153 342 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0153 342 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0153 342 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0153 342 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0153 342 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0153 Ssu-Chr2 8237999 8243686 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0153 5 331 Peroxidase AT2G22420 75.988 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0153 K00430 - gmx:100796737 589.726