Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0134 ATGATGGCGATTGGTCTTATGGGTGAACCGAAATTCTACGTGTCTTGCAACAAAACTGAGTCTCGGTTTTTGTTCATAAGCAACGTGGAGTTATATGGCTATGATTATGGGATCATGCCAAATTACACGCTACATCAGTGCCAGGAGTTGTGCCTTCAATTATGCGACTGTAAAGGCATCCAGTATACCTATATCTTTTCCGTTGGCACTTATACCTGTTACCCGAAGTTGCAATTGCGGAATGTGTATCGTTCACCGTATTTTAATGTTGATCTGTACTTGAAACTCCCGGCAAACAGTTCATATTCTTATGAGGGGTCCACAGATGAGCAGAGTCTTGATTGCTCTTCGAGTTTGAGAACGATACAGCTTGAGAGATCACATGACATAGGTCACGAAAGCAGATATGTTAAGTTCTTGCTTTGGtttgttgggggggggggggggagaggacTTGAAGTTTTGTGCATATTTGTGATTTGGTTTTTTCTGGTGAGAACAAGGGGGCAACAATATTCCGGTGTAGATGGACGAGTCTATAATCTGGCCATGACTGGTTTTAGGGGTGCAGGAGGGATTGTATACAAAGGTGTGTTGTTGGATCGACGAGTTGCAGCAGTGAAAAGACTCAAGGATGCTAATCAAGGAGAAGAAGAGTTCCTCGCAGAAGTAAGCAGCATTGAAAGGCTTAACCACATGAACTTGATTGAGATGTGGGGATACTGTGCCGAGGGAAAACATAGGCTACTGGTGTACGAGTACATGGAGCATGTATGGGTCTTTAGCACAAAATATCGAGTCCAATGCATTGGACTAGACCAAAAGGTTTGA 831 0.414 MMAIGLMGEPKFYVSCNKTESRFLFISNVELYGYDYGIMPNYTLHQCQELCLQLCDCKGIQYTYIFSVGTYTCYPKLQLRNVYRSPYFNVDLYLKLPANSSYSYEGSTDEQSLDCSSSLRTIQLERSHDIGHESRYVKFLLWFVGGGGGRGLEVLCIFVIWFFLVRTRGQQYSGVDGRVYNLAMTGFRGAGGIVYKGVLLDRRVAAVKRLKDANQGEEEFLAEVSSIERLNHMNLIEMWGYCAEGKHRLLVYEYMEHVWVFSTKYRVQCIGLDQKV 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0134 276 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 9 257 - -
Ssu2g0134 276 ProSiteProfiles PAN/Apple domain profile. 16 97 IPR003609 -
Ssu2g0134 276 ProSiteProfiles Protein kinase domain profile. 180 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g0134 276 SUPERFAMILY Protein kinase-like (PK-like) 188 257 IPR011009 -
Ssu2g0134 276 Pfam Protein kinase domain 188 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g0134 276 SMART ntp_6 18 96 IPR003609 -
Ssu2g0134 276 Gene3D Phosphorylase Kinase; domain 1 188 256 - -
Ssu2g0134 276 CDD PAN_AP_plant 15 97 - -
Ssu2g0134 276 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 9 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0134 Ssu-Chr2 7677043 7678062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0134 188 257 Receptor kinase-like Gene Family AT1G66980 47.143 4.61e-17 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Ssu2g0134 Pkinase 3.9e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0134 - - gmx:100792388 384.03