Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0124 ATGGATGCCACTCACACCATGTTTTGCAACAATGATCTGGTTAACCCCCTAAGCTCAATGGGCATGCAAGTCTCCTGCATTCTTGTTGTGTCGCACGTCTTCAACGTTGTGTTTAGGACCGTGGGTCAACCTGGACCCATTTCACAAATTCTGGCTGGGTTGGTGCTAGGTCCAATGTCACACATTGAGTACATAAAGGCTACATTCTTTCCCGCCAGTTCAATAAATTACTATGAAGTTGTGAGCTTCTTCTGTCGCATacatttcatgtttttatttggGTTAGAGATGAATATTCACTACACCATGCGCAATCTGCGTATGGTGAGCGTAGTAGCCTGTGGTGGTGCACTAATGGGTGGCGTGTTTGGTCTATCTGTCTCCTTTTATTTGCATCAAGAGTTAAACACCATTGACAATGCCTCCATGTATTATTTTTGCATGATCATTATGCTGGTGGTGTCATACACAAGCTCCCCCATGGTGATTCGTTTGGCAGCAGAGTTGAGGTTTGCAGCATCAGATGTTGGGCGAATCGCGGTGTCTTCTGCGTTGATTACAGAAATGGGGTGCTTGCTGTTCTTCAATGTGATGGTTAActggaggaaaaaaaatcacatttctgCTGGTTTAGGCAGCCTTGTAATTACTGCCTTGGTGGTTATTATAAACAGGTACTTAGCCGTTTGGTTGAACGCAAGACATCGAAACCAGAAGTACCTCAAGGCTCCTGAGCTGTTACTCATTCTGCTTCTGCTTCTAACTAGCTCAATGATAATAGAAATTTGGGGTTACAACAGTATCATTAGTTGTTTCATCATTGGCTTGCTGTTCCCTAAGGAAGGCAAAACAGCCAGAACATTGCTGCATAAACTTGGTTATTCTATTTACAACTTTGTACTTCCAGTGTATTTTGGGTACTTGGGCTTACAGTGTGACCTGATAAATGTCTTCAAGAGCCTGGAGCGTGCAGCCAACATGGCCATATTGATATTGTTGAGCATTGGAAGCAAGCTTGGTGGTACTCTTATAGTTTGCCGCTACCTTAAAATCCCTACCAGTGAAGGAATTTTTCTAGGCTTCATATTGAACACTAGAGGTTATGCTGATCTTCTATTCATCGGTGCAGCAGCAAAGCAAGTAATTACTTTTGATACAGACGCGTACAATGTTTTGCTGGTATCAATAGTACTTAACACAATAATATCAGGAATCATTGTGGCTTTTCTAGTAAGAGGGGAAGAAAGAATGTTTGCAAACAACCATACAGCAATTGAACCACAGCAAATGGAGGATGAGCTTCGAATTCTGGCTTGTGTGTATGACCCTCGTCAGGTATCTGCCACACTTGCCACAGTACTAGCAATACATGGCTCTAGGCAATCACCATCTACCACTTACTTAATGCACCTAATAGAGCTTGTGAAGAAGATCAAGTCTAACCTACTATACCATGAGAAAGAAAATGCTGACCTTagtgatgatgaggactatggTGGCAATGATGTGGTGGAAATCAACAATAGTTTGGATACCTTCAATGCAGAAACAAACATTCTGGTCCAGCAAAGAAGGGCAGTGTCTTCTTTCCCAGCTTTGTATGAAGATGTGTGCAATGAAGCAGAAGATCTTCAAGTGTCCATCATCATTCTTCCCTTCCACAAGCATCAACGCATTGATGGGAAGTTGGAAAGTGGGAAAGAGGGTATAAGGGTCACCAATCAGAAGGTGCTAAGACATGCCCCTTGTTCTGTTGGTGTCATTGTTGAAAGAGGACTTGCAAGGGCCCCTGGCTTCTCACAACTAGTAGCATCTGATGCCATACAAAATGTTGCAACACTTTTCTTTGGTGGCCCGGATGATCGTGAGGCCATTGCATGGAGCCTGAGAATCTCGGGTAGTCCACGTGTCAACTTGACAATCATCAGATTTCTGCTGACATCTTCATCACAGGATGAACAGATTGAGAGTGGACAATCTGAGGACAAAGAGATTATGATGTCATTGTCTGGTGAAGAGACTGTGAATGAGGTTGACAACACCTTCATGGTTGATTTCTACAATAGGTATGTGACTTCTGGCCAAATTGGGTACGTGGAAAAGTTTGTGAAGGATGGATCACAGACAGTGGAGTCTTTGAAAGAGATAGGGGACATGTACTCTTTGTTTGTAGTAGGAAAGGGTGGTAGAGGACAGAGTTCACTGACAATTGGGATGAGTGACTGGGAAGAGTGTCCAGAACTTGGAACGGTTGGTGATGTCCTGGCTTCTTCAGACTTTGATATTCATGGCTCAGTTTTGATCGTTCAACAACATAGAGATGCCAAGAAAGGCCTATTGCATGATTAG 2349 0.421 MDATHTMFCNNDLVNPLSSMGMQVSCILVVSHVFNVVFRTVGQPGPISQILAGLVLGPMSHIEYIKATFFPASSINYYEVVSFFCRIHFMFLFGLEMNIHYTMRNLRMVSVVACGGALMGGVFGLSVSFYLHQELNTIDNASMYYFCMIIMLVVSYTSSPMVIRLAAELRFAASDVGRIAVSSALITEMGCLLFFNVMVNWRKKNHISAGLGSLVITALVVIINRYLAVWLNARHRNQKYLKAPELLLILLLLLTSSMIIEIWGYNSIISCFIIGLLFPKEGKTARTLLHKLGYSIYNFVLPVYFGYLGLQCDLINVFKSLERAANMAILILLSIGSKLGGTLIVCRYLKIPTSEGIFLGFILNTRGYADLLFIGAAAKQVITFDTDAYNVLLVSIVLNTIISGIIVAFLVRGEERMFANNHTAIEPQQMEDELRILACVYDPRQVSATLATVLAIHGSRQSPSTTYLMHLIELVKKIKSNLLYHEKENADLSDDEDYGGNDVVEINNSLDTFNAETNILVQQRRAVSSFPALYEDVCNEAEDLQVSIIILPFHKHQRIDGKLESGKEGIRVTNQKVLRHAPCSVGVIVERGLARAPGFSQLVASDAIQNVATLFFGGPDDREAIAWSLRISGSPRVNLTIIRFLLTSSSQDEQIESGQSEDKEIMMSLSGEETVNEVDNTFMVDFYNRYVTSGQIGYVEKFVKDGSQTVESLKEIGDMYSLFVVGKGGRGQSSLTIGMSDWEECPELGTVGDVLASSDFDIHGSVLIVQQHRDAKKGLLHD 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0124 782 Pfam Sodium/hydrogen exchanger family 27 412 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Ssu2g0124 782 PANTHER CATION/H + ANTIPORTER 21 772 - -
Ssu2g0124 782 Gene3D - 19 420 IPR038770 -
Ssu2g0124 782 PANTHER CATION/H(+) ANTIPORTER 1 21 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0124 Ssu-Chr2 7452785 7455582 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0124 11 782 Antiporter Super Family AT1G79400 38.718 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0124 - - gmx:100804522 1429.08