Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0109 ATGGCAGGTGGTCAACTAGGAGTGCTAAACGCCCTTGACGGAGCGAAGACCCAATGGTACCACTTCACGGCCATCATCATCGCGGGCATGGGCTTCTTCACCGACGCCTATGACCTCTTCAGCATCCCCAACGTGACGAAACTCTTGGGCCGCATCTACTACACCCACCCGGGCAACCCCAAGCCCGGCACCCTCCCTCCCAACGTCTCCGCCGCCGTCAACGGCGTCGCCCTCTGCGGCACCCTCGCCGGCCAGCTCTTCTTCGGCTGGCTTGGTGACAAACTCGGCCGCAAAAAAGTCTACGGCATCACCCTCGCCCTCATGGTCTTCTCCTCCCTCGCCTCCGGCCTCTCCTTTGGCCACACCGCTAACGGCGTCATCTCCACCCTCTGCTTCTTCCGCTTCTGGCTCGGCTTCGGCATCGGCGGCGACTACCCCCTCTCCGCCACCATCATGTCCGAGTACGCCAACAAAAAGACACGCGGCGCCTTCATCGCCTCAGTTTTCGCTATGCAAGGATTCGGAATCCTCGCCGGTGCCGTTGTTTCCATCGTAGTTGCTACAGCGTTCGACCACGCGTACAGCGCTCCATCCTACGAAGTCAACCCTGAAGCATCGCTTGTTCCTCAAGCTGACTACGTTTGGCGCATCATCTTAATGTTCGGTGCTGTTCCAGCAGCTCTTACCTACTACTGGCGCATGAAGATGCCGGAAACGGCGCGTTACACGGCGCTCGTGGCGAAGAACGCGAAGCAAGCGGCGCAAGACATGTCGAAGGTGTTGCAGGTTGAGATCCAAGCTGAGCAAGAAAAGGTGGACATCATAGTTGAGAGAGAGGACAACAACTTTGGCTTGTTTTCCAAGGAGTTTGTTCGTAAACACGGGTTGCACTTGCTTGGAACAACGACCACTTGGTTTTTGCTAGACATTGCTTATTATAGCTCCAACCTTTTCCAGAAAGATATATACAGCAACATTGGGTGGCTTCCCCCTGCGAAGGAAATGAACGCGATTCAGGAGGTGTTTAAGGTTGCTAGAGCAACCGCGCTTATAGCGCTGTGTGGCACGGTTCCAGGGTACTGGTTCACGGTGGCTTTTATAGATCACTTGGGTCGTTTCTTCATTCAGCTCATGGGGTTTTTCTTTATGACTGTGTTTATGTTTGCCCTTGCCATTCCGTACCACCACTGGGCTACGAAGGAGCACAGGATTGGGTTTTTGGTGATGTATGCGTTCACCTTCTTCTTTGCCAATTTCGGCCCGAACTCGACCACCTTTGTGGTGCCGGCCGAGATCTTCCCGGCGAGGCTGCGGTCGACGTGCCATGGTATTTCGGCGGCCGCCGGGAAGGCCGGCGCCATCGTGGGCGCGTTCGGGTTCTTGTATGCTTCGCAGGATAAGGATCCTGCGAAGAGAGATGCGGGGTACCCGGCAGGGATTGGGATGAAGGACACCCTCATTTTGCTGGCTGTGGTGAATTGTCTTGGCATGTTTTTCACATTCTTGGTTCCGGAATCCAAAGGGAAGTCATTGGAGGAGTTGAGTGGGGAGAACGAAGATGAAGGTGATGAACATGAGCAGCAACAGCAAGGTGCCTCCACTTCTGTTAGGACCGTTCCGGTTTGA 1626 0.5523 MAGGQLGVLNALDGAKTQWYHFTAIIIAGMGFFTDAYDLFSIPNVTKLLGRIYYTHPGNPKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLALMVFSSLASGLSFGHTANGVISTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIASVFAMQGFGILAGAVVSIVVATAFDHAYSAPSYEVNPEASLVPQADYVWRIILMFGAVPAALTYYWRMKMPETARYTALVAKNAKQAAQDMSKVLQVEIQAEQEKVDIIVEREDNNFGLFSKEFVRKHGLHLLGTTTTWFLLDIAYYSSNLFQKDIYSNIGWLPPAKEMNAIQEVFKVARATALIALCGTVPGYWFTVAFIDHLGRFFIQLMGFFFMTVFMFALAIPYHHWATKEHRIGFLVMYAFTFFFANFGPNSTTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYASQDKDPAKRDAGYPAGIGMKDTLILLAVVNCLGMFFTFLVPESKGKSLEELSGENEDEGDEHEQQQQGASTSVRTVPV 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0109 541 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 508 IPR020846 GO:0022857
Ssu2g0109 541 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 5 530 - -
Ssu2g0109 541 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 5 530 - -
Ssu2g0109 541 MobiDBLite consensus disorder prediction 510 541 - -
Ssu2g0109 541 SUPERFAMILY MFS general substrate transporter 15 515 IPR036259 -
Ssu2g0109 541 Coils Coil 251 271 - -
Ssu2g0109 541 CDD MFS_PhT 25 507 - -
Ssu2g0109 541 Pfam Sugar (and other) transporter 26 514 IPR005828 GO:0016021|GO:0022857|GO:0055085
Ssu2g0109 541 Gene3D MFS general substrate transporter like domains 273 532 IPR036259 -
Ssu2g0109 541 Gene3D MFS general substrate transporter like domains 20 267 IPR036259 -
Ssu2g0109 541 TIGRFAM 2A0109: phosphate:H+ symporter 11 517 IPR004738 GO:0005315|GO:0006817|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0109 Ssu-Chr2 7018391 7020562 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0109 8 541 Inorganic Solute Cotransporters AT2G32830 76.449 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0109 K08176 - gmx:100795623 863.218