Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0099 atgcCTTCGTTTTCTATTCCGGGAGTCAACTTTGATCTTTCTCATGTCATTGCTGTGGCCCCCACGTTTGATGGGGTGGAGCATGTGGCAGGTGACATGTTTCTAAGTGTTCCCAAAGCTGACGTTACTTTTCTGAATTGGATTTTTCATGGTTGGGGAGATGAAGAGTGCATCCAAATCTTGAAGAACTGTAGGGAAGCCATtccaaaagaaaatggaaagAAGGAAGTAAGCATGATAGATTATAAGGACGTGGGTTTCATGCTGGACATGGTATGA 279 0.405 MPSFSIPGVNFDLSHVIAVAPTFDGVEHVAGDMFLSVPKADVTFLNWIFHGWGDEECIQILKNCREAIPKENGKKEVSMIDYKDVGFMLDMV 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0099 92 PANTHER 3'-HYDROXY-N-METHYL-(S)-COCLAURINE 4'-O-METHYLTRANSFERASE 2-LIKE 6 92 - -
Ssu2g0099 92 PANTHER O-METHYLTRANSFERASE 6 92 IPR016461 GO:0008168
Ssu2g0099 92 Pfam O-methyltransferase domain 7 74 IPR001077 GO:0008171
Ssu2g0099 92 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 92 IPR016461 GO:0008168
Ssu2g0099 92 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 8 74 IPR029063 -
Ssu2g0099 92 Gene3D Vaccinia Virus protein VP39 5 74 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0099 Ssu-Chr2 6820987 6822331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0099 6 74 Monolignol Biosynthesis Gene Families AT1G77520 60.870 1.38e-25 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0099 K22588 - dcr:108227416 115.546