Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0079 ATGGTTGAGACGATCtttctcctcttcctcttcttcttatCCCTCATTCTAACCTACACCATCTTCTTCACCACCACTTCTAAAACCACCTCCAATAATCTCCACCTTCCACCAAGTCCACCAAGCATTCCTTTAATAGGCCACCTCCACCTCCTCACTCCATCCCTACACAAATCACTCCAAACCCTCTCATCCAAACACGGCCCTCTCCTCCACCTCCGCCTCGGCCCCTCCCGCCGCCTCCTCCTCGTCTCCTCCGCCGCCGTCTCCGCCGACGTCTTCAAGACCCACGACCTCGCCTTCTCGTCGCGCCCCGCCTTCGCCTTCGCCGAGAAGCTCCCTTTTGGCACCTCCGGCTTCATCACCGCCCCCTACGGACCCTACTGGCGCTTCGTGAAGAAACTCTGCGTCACGGAGCTTCTCTCCACGCGCCAGCTGGAGCGGTCGAAAAGCATAAGGAGGGAAGAGATAGCGCGTTCCATCAAAAGGGTGTTGGAGAATGCTCGGGAGAGTGTTGCACTTGACTTGGGCTCTGAACTCATGAAACTCACCAACAACGTCACTTGCAGGATGGCCATGAGCACCAGTTGCTCGGAGAAATGCGAGGATGCTGAGAGGATCAGGAAGCTGGTAAAGGAGTCCTTCGAGCTAGCTGCGAAGCTGTGCTTTGGGGATGTGTTGGGCCCTCTCAAGGAGTTGAGTTTCTGGCTTTATGGGAAAAAGGCTTTGGATGTGAGCACAAGGTACGATGAGTTGTTGGAGAAGGTGCTGAAGGAGCATGAACACAAAAGATTATTGCGTAAAAATGGGCATTGCGGTGATGAAAGTGAAAGGGATTTAATGGACATTCTGTTAGACGTTTATGATGATGCTCATGCAGAGTTCAAGATCACAAGGACTCATATTAAAGCCTTCTTTATGGACCTCTTCATTGCAGGCACAGACACCTCAGCAGAAGCAATGCAATGGGCAATGGCTGAGCTCCTTAACCACCCTGAAGCATTTCAAAGGGTGAGAAAGGAGATAGAGTTGGTCACTAGGCAATGTTAG 1050 0.5114 MVETIFLLFLFFLSLILTYTIFFTTTSKTTSNNLHLPPSPPSIPLIGHLHLLTPSLHKSLQTLSSKHGPLLHLRLGPSRRLLLVSSAAVSADVFKTHDLAFSSRPAFAFAEKLPFGTSGFITAPYGPYWRFVKKLCVTELLSTRQLERSKSIRREEIARSIKRVLENARESVALDLGSELMKLTNNVTCRMAMSTSCSEKCEDAERIRKLVKESFELAAKLCFGDVLGPLKELSFWLYGKKALDVSTRYDELLEKVLKEHEHKRLLRKNGHCGDESERDLMDILLDVYDDAHAEFKITRTHIKAFFMDLFIAGTDTSAEAMQWAMAELLNHPEAFQRVRKEIELVTRQC 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0079 349 PANTHER CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 25-RELATED 9 347 - -
Ssu2g0079 349 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0079 349 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0079 349 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0079 349 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 347 - -
Ssu2g0079 349 SUPERFAMILY Cytochrome P450 35 345 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0079 349 Pfam Cytochrome P450 37 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0079 349 Gene3D Cytochrome P450 21 348 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0079 Ssu-Chr2 6210320 6217435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0079 19 346 Cytochrome P450 AT3G20940 47.273 1.59e-96 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0079 K23814 - gmx:100790065 526.554