Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0078 ATGAGAGACCCTGATTCTTGGGACCATCCAAATGAGTTTTGCCCTGAAAGGTTCCTGGAAGAGCAAGATGAGGATCTGAGTGATGGTAAAAGAATTAAGTTCAATTTTGTTCCATTTGGAGCAGGAAGGAGAGGGTGTCTAGGGACAACACTGGCATTCAACTTGATGACTACTGCAGTTGCTGCTATGGTGCAGTGCTTTGATTGGAAAATTGGTGAAGATGGAAAAGGAGAAAAGGTTGCTATGCAATTTGGGTCTGGCATGTCTTTGAGCATGGTGCACCCGCTTATTTGTCTTCCCGTATTACATTTTAACCCATATGATATATAA 330 0.4242 MRDPDSWDHPNEFCPERFLEEQDEDLSDGKRIKFNFVPFGAGRRGCLGTTLAFNLMTTAVAAMVQCFDWKIGEDGKGEKVAMQFGSGMSLSMVHPLICLPVLHFNPYDI 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0078 109 Pfam Cytochrome P450 2 83 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0078 109 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 39 48 IPR017972 GO:0005506|GO:0016705
Ssu2g0078 109 PANTHER CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 25-RELATED 1 107 - -
Ssu2g0078 109 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 107 - -
Ssu2g0078 109 PRINTS E-class P450 group IV signature 1 19 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0078 109 PRINTS E-class P450 group IV signature 30 46 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0078 109 PRINTS E-class P450 group IV signature 46 64 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0078 109 SUPERFAMILY Cytochrome P450 1 99 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0078 109 Gene3D Cytochrome P450 1 101 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0078 Ssu-Chr2 6209815 6210144 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0078 1 106 Cytochrome P450 AT1G50560 48.598 1.02e-30 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0078 K23814 - gmx:100790065 197.593