Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0064 ATGGTTGATCAGGTTCAGCACCCTAGAATCATTGAGAAGGTTGCAGGCCAGCTGCATCTCCATACTGGTCTTCCTTTGTACCACCAGAGGCGCTCGTTTGGGAACTACTCAAATGTTGCATTGCAGTATCCGGTAATGCCAGCATGCAGAGCGGCAACTGATATCTCCACTGTTGCAACAACAGCCTCCCCTGTGTTTGTTGCAGCTCCTGCTGAGAAAGGAAAGTTCATTATTGACTTTCTCATGGGTGGAGTTTCAGCTGCTGTGTCCAAAACTGCTGCTGCTCCCATTGAACGCGTTAAACTCTTGATCCAGAACCAGGATGAGATGATCAAAGCTGGTAGACTCTCTGAGCCATATAAGGGTATTGGTGATTGTTTTAAGAGAACAATGCAGGAAGAGGGTGTTGTTTCCCTGTGGAGAGGTAACACTGCAAATGTCATCCGTTATTTCCCTACTCAGGCTCTGAACTTTGCCTTCAAGGACTACTTTAAGAGGCTTTTCAATTTCAAGAAGGATAAGGATGGTTACTGGAAATGGTTTGCTGGTAACTTGGCCTCAGGAGGTGCTGCTGGTGCCTCATCCCTTTTGTTTGTCTACTCTCTTGATTATGCCCGTACCCGTCTGGCCAATGATGCTAAGGCTGCAAAGAAGGGTGGAGAAAGGCAATTCAATGGTCTTGTTGATGTCTACAGGAAGACATTGGCATCTGATGGTATTGCTGGTCTTTACCGCGGCTTCAACATTTCTTGTGTTGGAATCATTGTGTACCGTGGTCTCTACTTTGGAATGTATGATTCCCTGAAGCCAGTTCTCCTAACCGGCTCTTTGCAGGATAGCTTTTTCGCTAGCTTTGCCCTTGGATGGCTTATCACCAATGGTGCAGGTTTAGCCTCATACCCAATTGACACTGTTAGAAGAAGAATGATGATGACATCTGGGGAAGCTGTGAAGTACAAGAGCTCCATGGATGCGTTTGCACAAATCCTAAAGAATGAGGGTGCCAAGTCCTTGTTTAAGGGAGCTGGTGCTAACATCCTCCGTGCTGTTGCTGGTGCTGGTGTGCTTGCTGGTTATGACAAGTTGCAGGTGATAGTGTTTGGCAAGAAGTATGGTTCCGGGGGTGCTTAA 1131 0.4686 MVDQVQHPRIIEKVAGQLHLHTGLPLYHQRRSFGNYSNVALQYPVMPACRAATDISTVATTASPVFVAAPAEKGKFIIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTMQEEGVVSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLASDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFAQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0064 376 PRINTS Mitochondrial carrier protein signature 79 92 IPR002067 GO:0055085
Ssu2g0064 376 PRINTS Mitochondrial carrier protein signature 142 162 IPR002067 GO:0055085
Ssu2g0064 376 PRINTS Mitochondrial carrier protein signature 288 310 IPR002067 GO:0055085
Ssu2g0064 376 PRINTS Mitochondrial carrier protein signature 244 262 IPR002067 GO:0055085
Ssu2g0064 376 PRINTS Mitochondrial carrier protein signature 92 106 IPR002067 GO:0055085
Ssu2g0064 376 PRINTS Mitochondrial carrier protein signature 194 212 IPR002067 GO:0055085
Ssu2g0064 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 74 167 IPR018108 -
Ssu2g0064 376 PRINTS Adenine nucleotide translocator signature 284 300 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Ssu2g0064 376 PRINTS Adenine nucleotide translocator signature 76 88 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Ssu2g0064 376 PRINTS Adenine nucleotide translocator signature 179 192 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Ssu2g0064 376 PRINTS Adenine nucleotide translocator signature 153 165 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Ssu2g0064 376 PRINTS Adenine nucleotide translocator signature 120 141 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Ssu2g0064 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 279 365 IPR018108 -
Ssu2g0064 376 Gene3D Mitochondrial carrier domain 77 372 IPR023395 -
Ssu2g0064 376 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 2 376 - -
Ssu2g0064 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 179 271 IPR018108 -
Ssu2g0064 376 Pfam Mitochondrial carrier protein 75 171 IPR018108 -
Ssu2g0064 376 Pfam Mitochondrial carrier protein 280 365 IPR018108 -
Ssu2g0064 376 Pfam Mitochondrial carrier protein 178 274 IPR018108 -
Ssu2g0064 376 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 376 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Ssu2g0064 376 SUPERFAMILY Mitochondrial carrier 75 361 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0064 Ssu-Chr2 5673321 5675474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0064 1 376 Antiporters AT5G13490 80.153 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0064 K05863 - gmx:100793257 676.396