Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g4248 ATGGAAGCACTGCATCACCTCCACATCTTCATTTTTGTCTTAGCCGTCGTACATGTCACCTTTTCCGTACTCACCGTTGTGTTTGGAGGCGCCAGAATACGTCAGTGGAAACACTGGGAAGATTCAATTGCAAAACAGAACTACGAGACAGACCAAGTTCTGAAAGCGAAGGTGACTCATGTTTACCAGCATGATTTTATCCGGGGCCGTTTTGCTGGTTTTGGCAAAGACTCTGCTTTGGTCGGTTGGTTGctatcctttttaaaacaattttatggaTCTGTGACAAAATCAGATTATGTGACATTACGGCATGGTTTTATCATGACCCACTGCCAGTCAAAtccaaagtttaattttcacaagTACATGATTCGTGCCCTCGAAGATGATTTCAAGCAAGTTGTTGGTATAAGTTGGTATCTTTGGCTCTTTGTGGTTATCTTCTTGTTGCTTAATATTAATGGTTGGCATACATATTTCTGGATTGCTTTTATTCCCTTCATTCTTCTACTTGCTGTGGGCACTAAGCTGGGGCATGTGATAACCCAACTAGCTCATGAAGTAGCTGAAAAGCATGCAGCCATAGAAGGTGATTTAGTTGTGAAGCCATCAGATGATCACTTTTGGTTTCATCGGCCCCATGTTGTCCTCTTCTTGATTCACTTTATCCTTTTCCAAAATGCTTTTGagatagcattttttttctgGATATGGGTTACATATGGATTTGACTCCTGTATAATGGGACAAGTTGGTTACATTGTTCCAAGGCTCGTTATTGGGGTATTTATTCAGGTACTATGTAGCTACAGCACCCTGCCACTCTATGCAATTGTTACGCAGATGGGAACTCACTATAAGAGGGCAATATTTAATGAGCATTTGCAACAAAACATTGTTGGTTGGGCACAAAAAGCAAAGAAGAGGAAAGGACTAAAAGCTGAACTAAAAGCTGATAGCAATCCTGGCCAAGCCAGTTCTCATGAGAGTGCTAATACAGGAATCCAGCTTGGGTCAATTTTCGCCAAGAAGGCATCTGCGCCAGGAGACAGTACTTCTGTCCCCAAAGCAGATGGAACCAACTGA 1089 0.4022 MEALHHLHIFIFVLAVVHVTFSVLTVVFGGARIRQWKHWEDSIAKQNYETDQVLKAKVTHVYQHDFIRGRFAGFGKDSALVGWLLSFLKQFYGSVTKSDYVTLRHGFIMTHCQSNPKFNFHKYMIRALEDDFKQVVGISWYLWLFVVIFLLLNINGWHTYFWIAFIPFILLLAVGTKLGHVITQLAHEVAEKHAAIEGDLVVKPSDDHFWFHRPHVVLFLIHFILFQNAFEIAFFFWIWVTYGFDSCIMGQVGYIVPRLVIGVFIQVLCSYSTLPLYAIVTQMGTHYKRAIFNEHLQQNIVGWAQKAKKRKGLKAELKADSNPGQASSHESANTGIQLGSIFAKKASAPGDSTSVPKADGTN 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g4248 362 PANTHER MLO-LIKE PROTEIN 2 361 - -
Ssu1g4248 362 PANTHER MLO-LIKE PROTEIN 1 2 361 IPR004326 GO:0006952|GO:0016021
Ssu1g4248 362 Pfam Mlo family 2 332 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g4248 Ssu-Chr1 102986137 102990993 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g4248 1 329 MLO family AT4G02600 76.364 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g4248 K08472 - gmx:100785800 681.404