Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g4216 atggGCACTGATTCCACCGCCAGCAAATGGCTGGGCTTCGTGGCGGCTGTGTGGATTCAAGCAATCTCCGGCAACAACTACACTTTCTCGAATTACTCGGACGCTCTGAAATCCCTGATGCACCTAACCCAAATCGAGCTCAACAATCTCTCCGTGGCCAAAGATGTTGGGAAGGCTTTTGGGCTTCTCTCTGGGCTGGCCTCCAACCGGTTCCCCACTTGGGCCATTCTCCTCATTGGCTCCCTCGAAGGCCTCATCGGCTATGGCGTTCAGTGGCTCGTCGTCAGCCAAAGAATCCAACCCCTTCCCTACTGGCAgATGTGCATATTTCTATGCATGGGGGGAAACAGCACAACCTGGATGAACACGGCGGTTCTAGTCACGTGCATCCGCAACTTCCGCAGGAACAGAGGCCCTGTTTCCGGCATTCTAAAAGGCTATGTGGGGCTGAGCACCGCCATATTCACCGACCTATGTTCCGCTCTCTTCGCTGACGACCCTGCTTCCTTCCTCGTCATGCTGGCTGTCATCCCATTCGCCGTTTGCCTCTCCGGAATCTTTTTCCTCCGCGAGATTCCTCCCGGCGCCGGCGAGGACGAGGAAGAGTCCAAGTATTTCGGTGTTTTCAACGCCGTCGCCGTCTTCGTCGCCGTTTACCTCTTGGCTTTCGGGTTCGTGCCGAACCCCAGCGCTCTGGCGTCTCGCGCATTCGCCGTCGTTTTGCTTCTTCTGTTGGCGGCGCCGTTGGGAATCCCGGCCCACTCTTACTTCAAGGCTCGCAGGTTGGACCGGTTCAAACCGGCTCTGGATGTGGAGGGGCGGGTTGACGAACCGTTGCTTCGCGGAAACGACAAGGGAAGTGAAAGTGAGGTGAGGAGAGTGAATGTTTCGGCGGAAGACGCGGAGGCGGTGGTGGTGGAAAAGAGTGGACCGGCGGTGGGGGAGGAGCACACGATATGGGAGGCGCTGAAAACCGTGGATTTCTGGATTTTGTTTGTGTCGTTTCTTTGTGGGGTTGGAACGGGTTTGGCGGTTATGAATAATATGGGCCAAATCGGGTTGGCTCTTGGTTACTCGGATGCGTCCCTCTTTGTATCATTGACCAGTATTTGGGGCTTTTTTGGTCGGATCCTTTCGGGTTCGGTTTCGGAGCACTTCATCAAGAAAGCTGCAACTCCTAGACCTCTTTGGAATGCAGCATCTCAAGTTCTGATGGCCGTGGGATACATACTCATGGCCTTGGCTATGCCAGGTTCCCTTTACATAGGCTCCATTGTGGTTGGCATATGCTACGGAGTGCGGCTCGCAATTACCGTGCCAACAGCCTCAGAGTTGTTTGGCCTCAAATATTATGGTCTCATATACAACATTCTTATCCTTAATCTTCCCCTTGGCTCTTTCCTCTTTTCTGGTCTGCTTGCTGGCATTCTGTATGACATGGAGGCAACTACCACTGCAGGGGGAGGCAACACTTGTGTTGGAGCTCATTGTTACAGACTAGTATTCATAATCATGTCTGCTGCTTGTATTGTTGGGTTCTTCTTAGACATTCTATTGTCAATCAGAACTAAGAAGGTTTACAACAGTATCTCCTTGAGCAAAAACTTCAAGAAAAACAAAGTGACATCAAGTAGTCGATGA 1641 0.5222 MGTDSTASKWLGFVAAVWIQAISGNNYTFSNYSDALKSLMHLTQIELNNLSVAKDVGKAFGLLSGLASNRFPTWAILLIGSLEGLIGYGVQWLVVSQRIQPLPYWQMCIFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPASFLVMLAVIPFAVCLSGIFFLREIPPGAGEDEEESKYFGVFNAVAVFVAVYLLAFGFVPNPSALASRAFAVVLLLLLAAPLGIPAHSYFKARRLDRFKPALDVEGRVDEPLLRGNDKGSESEVRRVNVSAEDAEAVVVEKSGPAVGEEHTIWEALKTVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYSDASLFVSLTSIWGFFGRILSGSVSEHFIKKAATPRPLWNAASQVLMAVGYILMALAMPGSLYIGSIVVGICYGVRLAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTTAGGGNTCVGAHCYRLVFIIMSAACIVGFFLDILLSIRTKKVYNSISLSKNFKKNKVTSSSR 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g4216 546 CDD MFS_Mch1p_like 8 512 - -
Ssu1g4216 546 SUPERFAMILY MFS general substrate transporter 13 525 IPR036259 -
Ssu1g4216 546 Gene3D MFS general substrate transporter like domains 8 269 IPR036259 -
Ssu1g4216 546 Gene3D MFS general substrate transporter like domains 320 539 IPR036259 -
Ssu1g4216 546 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 539 - -
Ssu1g4216 546 Pfam Nodulin-like 9 252 IPR010658 -
Ssu1g4216 546 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 4 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g4216 Ssu-Chr1 102447020 102449673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g4216 7 539 Nodulin-like Gene Family AT4G34950 71.223 0.0 797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g4216 - - gmx:100813607 874.774