Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g4161 ATGGAGGTAGCGGTGGCCAAAGCTTTGAAACCGAGTTTAAGGGGAGAGTTCATCGTTCAGCAAACGCCGCTCTACGAGGAATTTTTGTGCCTGAACGCGAACACCGTCGGCGGCGGCGAAGATTTCTTCGTCGACGACCTCCTCGACTTCTCTAACGGCGAAGGATACgacgaagaaaaagaaagcGTATCTGTTTCGTCGCAGTCACAGGACCGCGGAGAAGACGATAGCAACTCCAATTCCACCGGCGTTTCCTATGACTCCTTTTTCTCCACCGAATTAGCCGTTCCGGCCGGTGATTTGGAGGACCTGGAGTGGGTTTCACACTTTGTGGACGATTCTCTCCCGGAGCTGTCACTTTTATACCCGGTTCGTTCGGTGGAAGCGAACCGGTGGGTTGAACCGGATCCTTCAGCGAAGAAAACGCCTCGTTTTCCGTGGGAAATGAAAATTACGACCAAGGCCAGAACCGTACGGAATAGAAAACCCAACGCTCGCGTGTGGTCGTTGGGCTTGGGCCCGTGCTCTCGCTCCCGTCTTCGCCGTCCTCGTGTTCTTCTTCCGCGACGGAGCCGCCCGCGAAGAAGCAGAAGAAGCGAGCCGAGGCCCAACCCGTTGGAGCCCAGATTCAGCGGCGGTGCAGTCATTGCCAGGTGCAGAAGACGCCGCAGTGGAGGACCGGCCCACTAG 690 0.5551 MEVAVAKALKPSLRGEFIVQQTPLYEEFLCLNANTVGGGEDFFVDDLLDFSNGEGYDEEKESVSVSSQSQDRGEDDSNSNSTGVSYDSFFSTELAVPAGDLEDLEWVSHFVDDSLPELSLLYPVRSVEANRWVEPDPSAKKTPRFPWEMKITTKARTVRNRKPNARVWSLGLGPCSRSRLRRPRVLLPRRSRPRRSRRSEPRPNPLEPRFSGGAVIARCRRRRSGGPAH 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g4161 229 MobiDBLite consensus disorder prediction 182 197 - -
Ssu1g4161 229 MobiDBLite consensus disorder prediction 182 229 - -
Ssu1g4161 229 MobiDBLite consensus disorder prediction 66 84 - -
Ssu1g4161 229 PANTHER GATA TRANSCRIPTION FACTOR 1 172 - -
Ssu1g4161 229 PANTHER GATA TRANSCRIPTION FACTOR 1 172 - -
Ssu1g4161 229 MobiDBLite consensus disorder prediction 54 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g4161 Ssu-Chr1 101312664 101313455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g4161 8 168 C2C2-Gata Transcription Factor Family AT5G66320 33.149 4.09e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g4161 - - gmx:100780311 267.7