Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g4145 ATGGCTTCCTCAAGCGGAACCTCGTCAGGGTCGTCCACGCTTCAGAATTCGGGTTCGGAGGAGGAGCTGCAGGCGCTGATGGAtcagaggaagaggaagagaatgatCTCGAACCGCGAATCAGCGAGGCGATCTCGAATGAGGAAGCAGAAGCACTTGGACGATCTGGCTTCCCTGGTGACTCAGCTGAGGAACGAGAATCACCAGATTCTCGCGTCGGTGAACCTCACCACCCAGAAGTACTTGGCGGTTGAGAAGGAGAACTCGGTGCTGAGAGCACAGGCGAACGAGTTGGGCCACCGGTTGGAGTCTCTGAACGAGATCGTCGACTTCTTGAACGCCACTAATGGTGTTTTTGGGCCGCCGGCCCCCTTCTTTGAGCCCGATAGCGGCTTCTTCAACAACCCTTTGAAGAACATGGCTTATCTCAGCCAGCCGATTATGGCTTCCGCAGACATGTTTCAGTACTGA 471 0.5287 MASSSGTSSGSSTLQNSGSEEELQALMDQRKRKRMISNRESARRSRMRKQKHLDDLASLVTQLRNENHQILASVNLTTQKYLAVEKENSVLRAQANELGHRLESLNEIVDFLNATNGVFGPPAPFFEPDSGFFNNPLKNMAYLSQPIMASADMFQY 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g4145 156 MobiDBLite consensus disorder prediction 24 50 - -
Ssu1g4145 156 Gene3D - 28 83 - -
Ssu1g4145 156 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Ssu1g4145 156 PANTHER BZIP TRANSCRIPTION FACTOR 1 154 - -
Ssu1g4145 156 SUPERFAMILY Leucine zipper domain 30 81 IPR046347 GO:0003700|GO:0006355
Ssu1g4145 156 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 154 - -
Ssu1g4145 156 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Ssu1g4145 156 Pfam bZIP transcription factor 30 80 IPR004827 GO:0003700|GO:0006355
Ssu1g4145 156 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Ssu1g4145 156 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Ssu1g4145 156 MobiDBLite consensus disorder prediction 1 23 - -
Ssu1g4145 156 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g4145 Ssu-Chr1 100986941 100987411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g4145 24 156 bZIP Transcription Factor Family AT4G34590 54.610 5.07e-46 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ssu1g4145 bZIP_1 1.7e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g4145 K25786 - gmx:778171 219.55