Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g4113 ATGGCCATTGTTGGCATCATATTGGTTGTAAAAGATGGCAAAGCAGTTATGTTGATAAGCGTGCAAAGGAAGCGCAAGGACCTTAAAGGGCAACATCTTGGTCCTTGGTCTAGAGTTGGATCGGTTCTTTTGGATCGATTTTGTTCTGTTACCCCACACATCATTACAGAGCTGAAGGGTGGTGAGAGGCAGTTCAATGGCTTAATTGATGTTTACAAGAAAACCATTAAGCCTGATGGTATTGCTGGCCTTCGTGGTTTCAACATCTCATGTGTTGGAATCATATTGTATTGTGATCTTTACTTTAGAATGTATGATTCTTTAAAACCAATGGTCTTAGTTGGTGGATTGCAGGATAGTTTCTTTGCAAGTTTTCTTTTGGCATAA 387 0.3979 MAIVGIILVVKDGKAVMLISVQRKRKDLKGQHLGPWSRVGSVLLDRFCSVTPHIITELKGGERQFNGLIDVYKKTIKPDGIAGLRGFNISCVGIILYCDLYFRMYDSLKPMVLVGGLQDSFFASFLLA 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g4113 128 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 59 127 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Ssu1g4113 128 Pfam Mitochondrial carrier protein 60 112 IPR018108 -
Ssu1g4113 128 Gene3D Mitochondrial carrier domain 18 128 IPR023395 -
Ssu1g4113 128 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-RELATED 59 127 - -
Ssu1g4113 128 SUPERFAMILY Mitochondrial carrier 57 126 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g4113 Ssu-Chr1 100453501 100454109 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g4113 60 128 Antiporters AT5G13490 75.714 5.49e-31 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g4113 K05863 - pvy:116113292 123.25