Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g4082 ATGGCGGGAGGAGGAGGCGGTGACGCCAGGCAGCTAGATCTCACACCTACATGGGCTGTCGCTGCGGTTTGCGCAATTATCGTTATCATTTCTATACTCTtggaaaaaattatacacaaatttgCACAGATgtttgaagaaagaaagaagcatGCATTGCTAGAAGCTCTTGAAAAGATTAAAGCCGAGCTTATGGTTTTGGGATTTATTTCTTTGCTCTTAACATTTGGCCAAAACTACATTTCTAAAATGTGTATTCCCGTGAAGTACGCAAACACAATGCTACCCTGTCGTCCCCCTGATCAACATGGAGGAGGTAGTGCAACCGAACATGGAGCTGGACCTCAGACAGGGAAGGGTGGTCATGAGGCTGAAGGTGGTAGTGGCCATCGCCGCAGGCTTTTATCATATGAACGTAGGTTTCTAGCTGCTGGTGGTGGAGGCTCAGGTTGTAAAATGGGTTACGTGCCTCTTATATCAGTGCACGGGTTGCATCAGttacacatttttatatttttcttggcTGTCTTCCACGTGATATACAGTGCTATAACAATGGCGCTTGGAAGAGCAAAGATTCGTGGATGGAAGATATGGGAACAGGACCATATCGTGGATCAAGATGCCTTGAATGATCCTAGAAGATTCAGACTTACTCATGAGACATCATTTGTGAGGGATCACACCAGTTTCTGGACTAAAACACCAGTTACCTTCTATCTTGTATGCTTCTTTCGGCAATTTTTCAGATCTGTTCGTAAGGCTGACTACTTGACCATGAGACATGGATTTGTGTCTGTCCATTTAGCACCGGGAAGTaagtttgattttcaaaaatatatcaaGAGGTCATTAGAAGATGACTTTAAGGTAGTTGTAGGAATCAGTCCAATACTTTGGGGATCAGTGGTGTTATTCTTGCTTGTGAATGTCCATGGATGGCATGCTTCTTTTTGGGTGTCTTTTCTTCCACTAGTGGTGATTCTGGCTGTTGGAACAAAGCTTCAAGCAATTATCACTCGAATGGCGCTTGACATAAAAGAAAGGCATGCTGTAGTGCAGGGGATCCCTCTTGTGCAAGTCTCAGACAAGTATTTTTGGTTTGCATGGCCTCAATTAGTTCTTTATCTCATCCATTTTGTCCTCTTTCAGAATGCATTTGAGCTGACATACTTCTGGTGGACATGGTATGAATTTGGTTGGGCATCTTGCTTTTACGAGGATGATAGTCTCATGATTTTCAGAGTAGCTCTTGGGTTAGGAGCTCAAGTCGTTTGCAGCTATGTCACACTTCCACTCTACGCGCTTGTTACCCAGATGGGATCGACGATGAAGAAGTCAATATTTGATGAACAAACATCGAAGGCGCTGAAACAGTGGCATAAGAATGCTCTGAAGAGGAAAGGATCGAAGGGACGCACCGAAACTCGAACGTTAGGTGGGAGCCCAGGGGAGTCACCGGCGAATTCGCCACGGCCAACGACAGCCGCAGAAACAGAAATGGCTGAGCAGGGCGCCACCATAGTGACCAGCGTGGATCACCAACACTATGTTCATAACCGCGACCTTCTAACTGGACCGTGA 1584 0.4356 MAGGGGGDARQLDLTPTWAVAAVCAIIVIISILLEKIIHKFAQMFEERKKHALLEALEKIKAELMVLGFISLLLTFGQNYISKMCIPVKYANTMLPCRPPDQHGGGSATEHGAGPQTGKGGHEAEGGSGHRRRLLSYERRFLAAGGGGSGCKMGYVPLISVHGLHQLHIFIFFLAVFHVIYSAITMALGRAKIRGWKIWEQDHIVDQDALNDPRRFRLTHETSFVRDHTSFWTKTPVTFYLVCFFRQFFRSVRKADYLTMRHGFVSVHLAPGSKFDFQKYIKRSLEDDFKVVVGISPILWGSVVLFLLVNVHGWHASFWVSFLPLVVILAVGTKLQAIITRMALDIKERHAVVQGIPLVQVSDKYFWFAWPQLVLYLIHFVLFQNAFELTYFWWTWYEFGWASCFYEDDSLMIFRVALGLGAQVVCSYVTLPLYALVTQMGSTMKKSIFDEQTSKALKQWHKNALKRKGSKGRTETRTLGGSPGESPANSPRPTTAAETEMAEQGATIVTSVDHQHYVHNRDLLTGP 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g4082 527 PANTHER MLO-LIKE PROTEIN 5-RELATED 1 479 - -
Ssu1g4082 527 MobiDBLite consensus disorder prediction 463 504 - -
Ssu1g4082 527 PANTHER MLO-LIKE PROTEIN 1 1 479 IPR004326 GO:0006952|GO:0016021
Ssu1g4082 527 MobiDBLite consensus disorder prediction 101 129 - -
Ssu1g4082 527 Pfam Mlo family 10 486 IPR004326 GO:0006952|GO:0016021
Ssu1g4082 527 MobiDBLite consensus disorder prediction 475 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g4082 Ssu-Chr1 100020006 100024456 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g4082 10 527 MLO family AT2G33670 59.808 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g4082 K08472 - gmx:100809512 872.463