Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g4079 ATGGCTGGGGCAGCTTCTGGAGAAAGAACCTTGCAGGAAACACCCACATGGGCAGTAGCTGTTGTTTGCTCAGTGTTCGTCATCCTCTCTATATTAATTGAACACGGAATCCATTCACTTGGAAAGTGGTTTCAAAAACGACATAAGAAGGCCATGAGTGAAGCCTTGGAGAAAATCAAAGCGGaatTAATGTTACTAGGATTCATATCCCTGTTACTTACTTTTGGTACAAAATATATTGCAAAGATATGCATCCCTGAGTCAGTTGGTGACATCATGCTTCCATGCAAGAAGGGTAAAGTCCCTTTGATCTCTCAGTCAGGGGTGCACCAAttgcatatatttatattcgTCCTCGCTGTTTTTCACATTTTCTACAGCGTTATGACTATGGTACTGGCCCGAGCaaaaATGAAGAAATGGAAGGCTTGGGAAGCGGAAACATCCTCCCTAGAGTATCAATTTACAAATGATCCTGCAAGGTTCAGGTTTGCGCATCAAACATCATTCGTTAGGCGTCACTCTGGTTGGTCTAGGATGCCAGGAATTCGATGGATAGTGGCATTCTTCAGGCAATTCTTTGCGTCTGTCACTAAGGTGGATTACATGACTATGCGGCATGGATTTATTAACGCACATTTTGCTCCCAATAGTAAATTTGACTtccaaaaatacattaaaagatccATGGAAGACGACTTTAAAGTGGTCGTTGGCATAAGGCTTACTGTAAACTTTATTGCTACAGAATGGTACACGCTCACCTGGCTATCATTTGCGCCGCTAGTGATACTTTTATTAGTGGGCACGAAGCTTGAACTTATAATCATGGAAATGGCCCAAGAAATCCAAGAACGAACCACAGTTGTTAGAGGAGTCCCTATTGTAGAGCCAAACAACAAGTATTTTTGGTTTAACCGGCCCCAGTGGATTATCTTCTTAATCCACTTTACCTTATTCGAGAATGCCTTCCAAATAGCCTATTTCTTGTGGACGTGGTATGAGTTTAAGATCACATCTTGCTTCCATGAAAACTTGCCGCTAATAATAACAAGGGTTGTCCTTGGGATAGCTTTACAAGTTGTATGCAGTTACATTACATTTCCTCTCTATTCCCTAGTAACACAGATGGGATCTCACATGAAGAAAGCAATCTTTGAGGAGCAAACTGCAAAGGCACTTAAGAAATGGCAAAAGGCTGCAAAGGATAGGAGAAAGTTAAGGAAAGCAGGGATAGATGTTCCTTCAGGGACTATGAGCGGGGAAACAACACCAAGCCAAGGCACATCGCCCCTGCATTTGCTTCACAAGTCCAAGCCTAGCCACATGGACATGGATAGTGTTCTCTATTCTCCACGATCATACCAATCTGACACTGATTTGTCTGAGACAGAGGGATCTACACACCAACTGAACGAAATAACACAAACGCATCAAGCTCCAAGGAATGGAGAAACTCATAATATCGATTTTTCCTTCGTGAAGCCTTAA 1491 0.4145 MAGAASGERTLQETPTWAVAVVCSVFVILSILIEHGIHSLGKWFQKRHKKAMSEALEKIKAELMLLGFISLLLTFGTKYIAKICIPESVGDIMLPCKKGKVPLISQSGVHQLHIFIFVLAVFHIFYSVMTMVLARAKMKKWKAWEAETSSLEYQFTNDPARFRFAHQTSFVRRHSGWSRMPGIRWIVAFFRQFFASVTKVDYMTMRHGFINAHFAPNSKFDFQKYIKRSMEDDFKVVVGIRLTVNFIATEWYTLTWLSFAPLVILLLVGTKLELIIMEMAQEIQERTTVVRGVPIVEPNNKYFWFNRPQWIIFLIHFTLFENAFQIAYFLWTWYEFKITSCFHENLPLIITRVVLGIALQVVCSYITFPLYSLVTQMGSHMKKAIFEEQTAKALKKWQKAAKDRRKLRKAGIDVPSGTMSGETTPSQGTSPLHLLHKSKPSHMDMDSVLYSPRSYQSDTDLSETEGSTHQLNEITQTHQAPRNGETHNIDFSFVKP 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g4079 496 MobiDBLite consensus disorder prediction 454 486 - -
Ssu1g4079 496 MobiDBLite consensus disorder prediction 454 496 - -
Ssu1g4079 496 PANTHER MLO-LIKE PROTEIN 1 98 494 IPR004326 GO:0006952|GO:0016021
Ssu1g4079 496 PANTHER MLO-LIKE PROTEIN 98 494 - -
Ssu1g4079 496 PANTHER MLO-LIKE PROTEIN 3 99 - -
Ssu1g4079 496 MobiDBLite consensus disorder prediction 417 431 - -
Ssu1g4079 496 PANTHER MLO-LIKE PROTEIN 1 3 99 IPR004326 GO:0006952|GO:0016021
Ssu1g4079 496 MobiDBLite consensus disorder prediction 412 431 - -
Ssu1g4079 496 Pfam Mlo family 96 438 IPR004326 GO:0006952|GO:0016021
Ssu1g4079 496 Pfam Mlo family 8 98 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g4079 Ssu-Chr1 99996092 100000019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g4079 5 482 MLO family AT2G39200 47.477 3.92e-171 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g4079 K08472 - gmx:100810044 887.486