Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g4032 ATGTGTTCACTTTTACCAACCTTAATCCCTTCAAACCAACATCTGAGAATGGCCAAGGCGGAGAAGAAGCCAGCAGAGAAGTCGCACAGGAGAAGTAGCAGAAAATTCACTTTCAGTCACACAACTAGTGTTTGGGACTATCAATATCTTCAGGGTATTTCAGATATGAAATCAATATCAAGAAAGGGAAGCAGCATTATAGATGACTGGGATGAACGTCCTCACACAATTGAAGAAGTGAAGGTCCTATTGCAGCAGAGGAAAGAAGCTGGAATATGCACGAAGGTGATGAGAATGTTGCATGTGATCAATATCACAAATATAAGGTCTGTGGCCATggagtatatatataaagaaccaCGAGAAGGTCATCGTCAAGGCTTATTCCAGGACCTGTATGAGAAGGCTGTGGCACAGTTTTGGATTAGTTTTGCAGAGGAAAAGGTAAGAAGAGCATTTTGTTTGTCATCCTTTGTGACTGTTCGAGAAGAGTTTCAGAAAGCAACAAAGAAAGTTAGAGAAGTATTCAAAGTATTAGAAGAAACCATTGGGGACAAAAAGTATTTTGGTGGTGAAGAAATTGGATTGTTAGACATAATCTTGGGATGGATGGCCATGTCATTTGGAAAGGGGGTTGTGAAATCAAATGTGTGA 654 0.3914 MCSLLPTLIPSNQHLRMAKAEKKPAEKSHRRSSRKFTFSHTTSVWDYQYLQGISDMKSISRKGSSIIDDWDERPHTIEEVKVLLQQRKEAGICTKVMRMLHVINITNIRSVAMEYIYKEPREGHRQGLFQDLYEKAVAQFWISFAEEKVRRAFCLSSFVTVREEFQKATKKVREVFKVLEETIGDKKYFGGEEIGLLDIILGWMAMSFGKGVVKSNV 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g4032 217 PANTHER GLUTATHIONE TRANSFERASE GST 23-LIKE 107 209 - -
Ssu1g4032 217 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 107 209 IPR045073 -
Ssu1g4032 217 CDD GST_C_Tau 133 205 IPR045074 GO:0004364|GO:0006749
Ssu1g4032 217 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 131 217 IPR010987 -
Ssu1g4032 217 Gene3D - 131 212 - -
Ssu1g4032 217 SUPERFAMILY GST C-terminal domain-like 128 208 IPR036282 -
Ssu1g4032 217 Pfam Glutathione S-transferase, C-terminal domain 159 201 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g4032 Ssu-Chr1 99343497 99345759 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g4032 33 92 IQD Protein Family AT4G00820 61.667 1.38e-18 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g4032 - K00799 gmx:100500361 117.857