Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g4011 ATGGAGAAAAAGCTTAGGCTGAAGAACAAATTCTTGAAGGCACTACCAAAAGCAGTTGCAGCAGTCACTATGACTTTTCAAAACCCTCCATTCAGCCCCGGCAGAGACCACAAATCAAAACCTATGGTATCCATGATTCCCCATGAAGCTAGAACTAGAAGAAAGTCCCATGATAGGGGCAATGGCATTGATGAAATTGATTCTCAAGAACCCACTTCACCAAAAATCTCATGCATGGGACAGATCAAGCACAAGAAGAAACGGATCAAAAAAGCCAAGGCCAAGAGTATGTCCATGCCTAAAGAAGCGAAAAACGTTACTAGCAATAAATCATCCTCTGCTTCCAGAAACATAGAGGTAAAGAAGCACGCTTCCGCgtttcaaaaaatgttattattcaaTGGGGCGAAGCCAAAATCTAAGGGGAGGAAATCCAACGCTTCTGCGCCTAGAGATATTAATAACGATGATGCTCTTGCCGAAGCAGCACGTGCACCGCACGTGAGTCAGATGAGAAGGTTTTCAAGTGGACGTGACGCTCTtgctaattttgattggagggTGGCTCAGGTGGCGCCAGAGGAAGAGGAAATTGATTACTATTCGGatgaagaagaggaggaggtTATGATCCCTTTCTCTGCACCCATTTTGGTTGGTGGTGGGGTTGGTCATGGGGGTGTGCTTAATTTGAAGCCACgaaaagaaattaatctatGGAAGAGAAGAACCATGGCTCCACCTAGGCCCCTTCAATTGGACAGAGCAAActga 774 0.4147 MEKKLRLKNKFLKALPKAVAAVTMTFQNPPFSPGRDHKSKPMVSMIPHEARTRRKSHDRGNGIDEIDSQEPTSPKISCMGQIKHKKKRIKKAKAKSMSMPKEAKNVTSNKSSSASRNIEVKKHASAFQKMLLFNGAKPKSKGRKSNASAPRDINNDDALAEAARAPHVSQMRRFSSGRDALANFDWRVAQVAPEEEEIDYYSDEEEEEVMIPFSAPILVGGGVGHGGVLNLKPRKEINLWKRRTMAPPRPLQLDRAN 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g4011 257 MobiDBLite consensus disorder prediction 47 65 - -
Ssu1g4011 257 PANTHER SYRINGOLIDE-INDUCED PROTEIN 14-1-1 7 257 - -
Ssu1g4011 257 PANTHER OS09G0542900 PROTEIN 7 257 IPR038796 -
Ssu1g4011 257 MobiDBLite consensus disorder prediction 80 94 - -
Ssu1g4011 257 MobiDBLite consensus disorder prediction 133 154 - -
Ssu1g4011 257 MobiDBLite consensus disorder prediction 47 117 - -
Ssu1g4011 257 MobiDBLite consensus disorder prediction 101 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g4011 Ssu-Chr1 99029876 99030649 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g4011 - - gmx:100794321 370.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0028 5 465485 466237 Ssu1g4011 1 99029876 99030649 PCT