Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3994 ATGAAAGGCCATACACTTTTGTTGCATTTATTCTGCACTCTCTTGCTGTTTCTTGGAGTGCTAAAGTCATCTTCGGCAGGGAATGATAGTAACGATGACACTAACGGTAAAGGAGTTTACATCGTGTATATGGGAGCCGCGGATTCCACAAATGCTTCTCTTCGGAATGACCACGCTCAGGTTCTGAATTCAGTTCTAAGAagGAATGAGAATGCTCTAGTACGCAACTACAAACATGGGTTCTCAGGGTTCGCAGCTCGACTATCAGAAGAGGAGGCAACCGCAATTGCTTACAAACCCGGCGTCGTGTCTGTTTTCCCTGACTCCGTTCTGAAGCTCCACACAACACGTTCCTGGGATTTCCTCAAATACCAAACTCACGTCAAAATCGACACCAAACCAAACACGGTTTCCAATTCTTCTTCCTCGTCAGACATCGTCATTGGCATCTTAGACACAgGTATATGGCCGGAGGCGGCGAGTTTTAGCGACGAGGGTTTGGATCCTGTTCCATCCCGTTGGAAAGGCACCTGCATGAAATCCCAAGACTTCAATTCGTCTAATTGTAACAGGAAGCTAATTGGCGCGAGGTTTTACACTGACCCAAATGGGGACGATGACGAGGGCGACAACACGGTAAGGGATTCGATTGGCCACGGGACCCACGTGGCGTCGACGGCGGTGGGTGCCGCCGTGACAAACGCATCGTACTACGGTCTCGCGGCGGGGAGCGCAAAGGGAGGGTCCCCAGAGTCTCGATTGGCGGTTTACAGAGTGTGTTTTAACATTGGATGTCGTGGGTCGGCAATTCTGGCGGCGTTTGACGATGCCATTGCGGACGGAGTGGATGTGCTGTCGCTGTCGCTCGGAGCTTCGCCCGGGTTCCGACCCGATTTGACGTCCGACCCGATTGCGATCGGAGCATTCCACGCCGTGGAGCGCGGCATCCTGGTGGTCTGCTCCGCCGGGAATAGTGGACCGAGCTCGTACACGGTCGTCAACGACGCACCTTGGATTTTAACCGTTGCAGCTTCCACCATCGACCGGGATTTTCAGTCCAGCGTTGTCTTGGGTGGTAACAAAACCATCAAGGGCAGAGCCATAAATTTCTTCCCGCTTTCAAGTTCCACCACGTATAGAATAATATACGGTGAGTCTGCCAAGACGGATAGCACCAGCTTGGCTGAAGCAAGAAAATGCCACCCAGATTCATTAGATGGAAATAAAGTCAAAGGAAGGATTGTGGTCTGTGATGGCAAAGATGATGAATATTCAACCAGTGAAAAAGCTGACACGGTGAAAGCGGTGGGAGGAATAGGTCTGGTTCATATTACTGACGATAATGGAGTTCTGGCATCAAATTATGGGGACTTCCCAGTAACAGTGATAAGTTCAAAAGATGGCGTCACAATCCTCCAGTACATCAATTCAACCAGCAATCCAGTGGCAACAATTCTACCAACAGCTACAGTTCTTGATTATAAGCCTGCTCCCCTGGTGCCAAATTTTTCATCAAGAGGGCCTTCAACGCTTTCAAGCAATATTCTCAAGCCTGATATTGCAGCACCGGGAGTTAACATTCTCGCGGCATGGATTGGAAATAGCGCAGATGAGGTTCCGGAAGGAAGAAAGCCCTCACTCTACAACATAATCTCAGGGACTTCCATGGCTTGTCCACATGTTTCAGGGCTTGCAAGCAGTGTCAAAACACGGAATCCCACTTGGAGTGCCTCCGCAATCAAATCTGCCATCATGACTACAGCAATTCAAAACGACAACTTGAAGGCTCCCATAACAACGGATTCAGGGTTGGTAGCCACACCTTATGACTATGGAGCAGGGGAAATGACAACGTCTGAACCATTGCAACCAGGGCTAGTTTACGAAACCAGCACCATTGACTACTTGAACTTCTTGTGTTACATTGGACTCGACATAACCTCGGTTAAGGTCATCTCCAGAACTGTCCCTAATAATTTCAGTTGCCCCAAGGATTCGAGTTCTGATCTCATCCCCAACATCAACTACCCTTCCATAGCAATGAACTTCACTGGCAAAGGAACTGTGAAGGTGAGCAGAACTGTCACAAACGTTGGTGAAGAAGATGAAACAGTGTACTCCCCCGTTGTCGATGCCCCCAGTGGAGTAAATGTTACATTAAATCCAGAAAAACTTCAGTTTACGAAAAGTAGTAAAATACTAAGCTACCAAGTTATTTTCTCCTCAACTTTGACCTCCTTGAAGGAAGATCTCTTTGGATCTATTACTTGGAGTAACGGTAAGCACATGGTTCGAAGTCCTTTTGTATTAACTAAATAG 2319 0.4804 MKGHTLLLHLFCTLLLFLGVLKSSSAGNDSNDDTNGKGVYIVYMGAADSTNASLRNDHAQVLNSVLRRNENALVRNYKHGFSGFAARLSEEEATAIAYKPGVVSVFPDSVLKLHTTRSWDFLKYQTHVKIDTKPNTVSNSSSSSDIVIGILDTGIWPEAASFSDEGLDPVPSRWKGTCMKSQDFNSSNCNRKLIGARFYTDPNGDDDEGDNTVRDSIGHGTHVASTAVGAAVTNASYYGLAAGSAKGGSPESRLAVYRVCFNIGCRGSAILAAFDDAIADGVDVLSLSLGASPGFRPDLTSDPIAIGAFHAVERGILVVCSAGNSGPSSYTVVNDAPWILTVAASTIDRDFQSSVVLGGNKTIKGRAINFFPLSSSTTYRIIYGESAKTDSTSLAEARKCHPDSLDGNKVKGRIVVCDGKDDEYSTSEKADTVKAVGGIGLVHITDDNGVLASNYGDFPVTVISSKDGVTILQYINSTSNPVATILPTATVLDYKPAPLVPNFSSRGPSTLSSNILKPDIAAPGVNILAAWIGNSADEVPEGRKPSLYNIISGTSMACPHVSGLASSVKTRNPTWSASAIKSAIMTTAIQNDNLKAPITTDSGLVATPYDYGAGEMTTSEPLQPGLVYETSTIDYLNFLCYIGLDITSVKVISRTVPNNFSCPKDSSSDLIPNINYPSIAMNFTGKGTVKVSRTVTNVGEEDETVYSPVVDAPSGVNVTLNPEKLQFTKSSKILSYQVIFSSTLTSLKEDLFGSITWSNGKHMVRSPFVLTK 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3994 772 ProSitePatterns Serine proteases, subtilase family, histidine active site. 219 229 IPR022398 -
Ssu1g3994 772 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.1 28 770 - -
Ssu1g3994 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 114 IPR037045 -
Ssu1g3994 772 Pfam Fibronectin type-III domain 673 769 IPR041469 -
Ssu1g3994 772 Pfam Peptidase inhibitor I9 39 114 IPR010259 -
Ssu1g3994 772 CDD PA_subtilisin_like 354 485 - -
Ssu1g3994 772 CDD Peptidases_S8_3 111 589 IPR034197 -
Ssu1g3994 772 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Ssu1g3994 772 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Ssu1g3994 772 PRINTS Subtilisin serine protease family (S8) signature 552 568 IPR015500 -
Ssu1g3994 772 ProSiteProfiles Serine proteases, subtilase domain profile. 118 622 - -
Ssu1g3994 772 Gene3D - 639 772 - -
Ssu1g3994 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 553 563 IPR023828 -
Ssu1g3994 772 Gene3D Peptidase S8/S53 domain 145 635 IPR036852 GO:0004252|GO:0006508
Ssu1g3994 772 Gene3D - 348 492 - -
Ssu1g3994 772 Pfam Subtilase family 143 600 IPR000209 GO:0006508|GO:0008236
Ssu1g3994 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 770 IPR045051 -
Ssu1g3994 772 SUPERFAMILY Subtilisin-like 137 616 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3994 Ssu-Chr1 98749473 98754172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3994 33 771 Subtilisin-like Serine Gene Family AT1G20150 53.958 0.0 787
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3994 K25898 - gmx:100820194 1315.44