Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3932 ATGATATGGTATTATTCGAAAGGAGTGGTGGCATCTGGAATTGCCTTCGCTGTACAGATATGGTGCATTGACAGAGGTGGCCCTGTGTTCGTTGCCGTGTATCAGCCTGTTCAAACtcttgttgttgctattatggCTTCCGTTGCTTTAGGCGAAGAGTTCTACTTGGGCGGGATCATTGGAGCAGTGTTGATCGTTGTGGGACTGTACTTTGTCTTGTGGGGTAAAAGCGCAGAGAGAAAGTTTGCAAAGGAACAAGTTGCGATTACATCCACCCCAGAGCATAGCAGCATCAGGTCCTCAAGCCATGCCAAAACATCACTTACTCAGCCCCTTCTCCCTTCATCTACGGAGAATGTCTGA 363 0.4573 MIWYYSKGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASVALGEEFYLGGIIGAVLIVVGLYFVLWGKSAERKFAKEQVAITSTPEHSSIRSSSHAKTSLTQPLLPSSTENV 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3932 120 MobiDBLite consensus disorder prediction 90 120 - -
Ssu1g3932 120 SUPERFAMILY Multidrug resistance efflux transporter EmrE 3 77 - -
Ssu1g3932 120 PANTHER WAT1-RELATED PROTEIN 7 105 IPR030184 GO:0016021|GO:0022857
Ssu1g3932 120 PANTHER WAT1-RELATED PROTEIN 7 105 - -
Ssu1g3932 120 Pfam EamA-like transporter family 3 73 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3932 Ssu-Chr1 97406347 97407960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3932 8 120 Nodulin-like Gene Family AT1G75500 75.214 1.46e-52 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3932 - - gmx:100786714 208.379