Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3845 ATGGCATCAATTACCTCTGTGGCTCCTCCTTTGCTTCAACTACAATCTTCATTAAAGAGAAAACCCTGCAACTGGAAGCGTTCCTCCATGCATTCTTTTACGATCAAAGCCTCAGTCTCAGAAACGGCGTCGTTGCCGGTCCCCGAGACCAACAAGCTCCCAATGCGCAAAATCCCCGGAGACTACGGTCTCCCTTTCATAGGACCCATCAAAGACCGCCTCGACTATTTCTACAACCAAGGACGCGACAAGTACTTCCAATCCCGCGCCCAAAAGTACAACTCCACCGTGTTCCGCGCCAACATGCCACCCGGCCCCTTCATCGCCTCCAACCCAAACGTCATCGTTTTGCTCGACGGCAAAAGCTTCCCGGTCCTCTTCGACGTCACCAAAGTCGAGAAGCGTGACGTCTTCACCGGCACCTTCATGCCCTCCACAGAACTCACCGGCGGCTACCGAATCCTCTCCTACCTCGACCCCTCCGAACCCAGACACGAACAACTCAAACGCCTCTTGTTCTTCCTCCTCAAGTCCCGAAGCAGCCACGTCATCCCCGAGTTCCATTCGAGCTACGCATCCCTCTTCGACACGTTGGAGAAGGAGCTTGCCACCAAAGGAAAAGCTAGTTTCGGAGACGCCAACGACCAAGCAGCATTTAACTTCCTCGCTCGCGCGCTTTATGGGACAAACCCCTCCGACACAAACCTCGGACGCGACGGCCCAAGCATAGTCCAGAAATGGGTGCTGTTCCAACTCGGCCCAATTTTAGTACTGGGCCTGCCCAAGTTCCTCGAAGATCCTACCCTCCACACCTTCCGCATCCCTGCTTTTCTGATCAAGAAAGATTACCAGAGGCTTTACGATTTCTTCTACGAGTCATCTGGGTCCGTACTCGACGAAGCGTCGCGTTTTGGCATCTCCAAAGAAGAAGCGTGCCACAACCTGTTATTCGCCACGTGCTTTAACTCGTTCGGGGGCATGAAGATTTTCTTCCCCTCCATGGTGAAATGGATTGCACGTGCGGGCGTCAAACTTCACGCCCGGCTCGCGGAGGAGGTCAGGGCAGCCGTTAAGTCTAACGGCGGGAAGATCACGATGGCGGCGATGGAGGCGATGCCGTTGATGAAGTCGGTGGTTTACGAGGCGTTTCGTATTGAACCGCCGGTGCCGCTGCAGTACGGGAAGGCGAAGAGGGACTTGGTGATAGAGAACCACGAGAATGCGTTTTTGGTGAAAGAAGGGGAAATGTTGTTCGGGTTTCAACCTTTTGCGACCAAAGATCCGAAGATATTTGAGAGCGCGGAGGAGTTTGTGCCGGATCGATTCGTGGGTGAGGGAGAGAAGCTGTTGAAACATGTTTTTTGGTCGAATGGTCCTGAGACGGAGGATCCCACCCTTGGGAACAAGCAATGTGCGGGCAAGGATTTTGTGGTGCTGTTTTCTAGGCTTTTGGTGGTGGAGCTGTTTCTTCGTTATGATTCCTTTGATGTTGAAGTGGGGCAGTCGGCCTTGGGTTCTTCTGTTGCTTTCACCTCCCTCAAGAAAGCAAgcttttag 1557 0.5311 MASITSVAPPLLQLQSSLKRKPCNWKRSSMHSFTIKASVSETASLPVPETNKLPMRKIPGDYGLPFIGPIKDRLDYFYNQGRDKYFQSRAQKYNSTVFRANMPPGPFIASNPNVIVLLDGKSFPVLFDVTKVEKRDVFTGTFMPSTELTGGYRILSYLDPSEPRHEQLKRLLFFLLKSRSSHVIPEFHSSYASLFDTLEKELATKGKASFGDANDQAAFNFLARALYGTNPSDTNLGRDGPSIVQKWVLFQLGPILVLGLPKFLEDPTLHTFRIPAFLIKKDYQRLYDFFYESSGSVLDEASRFGISKEEACHNLLFATCFNSFGGMKIFFPSMVKWIARAGVKLHARLAEEVRAAVKSNGGKITMAAMEAMPLMKSVVYEAFRIEPPVPLQYGKAKRDLVIENHENAFLVKEGEMLFGFQPFATKDPKIFESAEEFVPDRFVGEGEKLLKHVFWSNGPETEDPTLGNKQCAGKDFVVLFSRLLVVELFLRYDSFDVEVGQSALGSSVAFTSLKKASF 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3845 518 PRINTS E-class P450 group IV signature 471 489 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3845 518 PRINTS E-class P450 group IV signature 372 388 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3845 518 PRINTS E-class P450 group IV signature 425 443 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3845 518 SUPERFAMILY Cytochrome P450 53 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3845 518 Pfam Cytochrome P450 346 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3845 518 Gene3D Cytochrome P450 53 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3845 518 PANTHER ALLENE OXIDE SYNTHASE 1, CHLOROPLASTIC-LIKE 37 516 - -
Ssu1g3845 518 PANTHER CYTOCHROME P450 26 37 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3845 Ssu-Chr1 95936115 95937671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3845 1 518 Cytochrome P450 AT5G42650 65.134 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3845 K01723 - gmx:100807192 904.434