Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3841 ATGGACCTGGAAAATCCCCTCTCACAATCAAGAGGGTTATTTACCATCTTCTTCGGGCTGCTCTTATTTCTCTTTGTACTTTCATCCATATTGAGAAGGCGCAGAACTGCAACTAGAAAAGCACCACCAGAACCAAGTGGTGCGTGGCCTTTGATTGGGCACCTCCACCTTTTACGTGGGTCACAACCACCTCACGTCACGTTGGGCAACTTGGCGGACAAATATGGCCCCGTCTTCACCTTGCGTCTCGGTGTTCACAAAACCTTGATTGTGAGCAATTGGGAAATGGCCAAACAGTGCTTTACCGTCAACGACAAAGCGTTTGCTAACCGTCCTAAATCTCTAGTCCATGAAGTGTTGGGCTACAACTTTTCCATGATTGGGTTCAGCCCCTACGGCTCTTATTGGCGTCAGGTGCGCAAGATTGCCACCGTGCAGCTCCTCTCTGCTCTCCAGGTAGACATGCTCAAGCACGTGATGGAATCAGAGGTGAAGGCAGCAATGAAAGAGAGTTACCATATTTGGCTAAAGAATAACAAGAATGGTTCCGAAAAGGCATTGACCGAGATGAAGAGATGGTTTGGGGACATAGCCTTAAACGTTATGTTCAGAACAATGGTAGGAAAACGTTTTGTTTGTGATGATGGTGAGAATAATGAAGAGAATGAACGTATTCGAAAGGCACTGAGGGACTTCTTTGATCTTAGCGGGTCATTCGCTGTCTCTGACGCTCTGCCGTATTTGAGATGGTTGGATTTGGATGGACTAGAGAAGCAAATGAAGAAGACGGCGAAAGAGTTAGATGGCTTTATTCAAGTTTGGCTTGAAGAACATAAACACAACAGGAACTGTGGTTCAGGTGAACAGAAAGGTAACCGGGACTTCATGGACGTGCTTCTTAGCCTTGCTGATGAGGGTGAAGAGTTTGACGGTCGTGACCCCAATACCACAATCAAAGCTACATGCCTGGTATgtatcatcattaattttaagggtgaataa 1002 0.4521 MDLENPLSQSRGLFTIFFGLLLFLFVLSSILRRRRTATRKAPPEPSGAWPLIGHLHLLRGSQPPHVTLGNLADKYGPVFTLRLGVHKTLIVSNWEMAKQCFTVNDKAFANRPKSLVHEVLGYNFSMIGFSPYGSYWRQVRKIATVQLLSALQVDMLKHVMESEVKAAMKESYHIWLKNNKNGSEKALTEMKRWFGDIALNVMFRTMVGKRFVCDDGENNEENERIRKALRDFFDLSGSFAVSDALPYLRWLDLDGLEKQMKKTAKELDGFIQVWLEEHKHNRNCGSGEQKGNRDFMDVLLSLADEGEEFDGRDPNTTIKATCLVCIIINFKGE 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3841 333 Pfam Cytochrome P450 42 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3841 333 PANTHER P450, PUTATIVE-RELATED 16 327 - -
Ssu1g3841 333 SUPERFAMILY Cytochrome P450 42 313 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3841 333 Gene3D Cytochrome P450 26 329 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3841 333 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3841 333 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3841 333 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3841 333 PANTHER CYTOCHROME P450 82C3-RELATED 16 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3841 Ssu-Chr1 95838431 95839432 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3841 13 327 Cytochrome P450 AT4G31970 44.375 8.29e-93 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3841 - - gmx:100778017 483.411