Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3829 ATGGATGCCACTTGCAGTCGTACTACTAGAAGTTTCGCACAAGGAGTACTTGTCTTCCTTGTGATTACGTGTGTGGCCGCGGGGAGCCAGCCCAGAAATATTTTAGTTGGAGACTCACAAGGTTGGCTTGCGGGCACTAACTACACCGAATGGGCCATCCAAAATAGCCCCTTCCACATAAATGACACACTGGTGTTCAAGTATCCTCCACCAGGCAATTCCACGGTGGCTCAGAGCGTGTACTTACTACCAAACCTGTGGAACTACATAACATGCGAATTCAGGGGGGCAAAGCTGTTGGGGAGCGCAACTGAGGGAGCTGGGGAGGGCTTTAAGGTTGAGCTAAATCAGCCGAGGCCTTACTATTTTGCCTCTGCAGAAGGTAACGCTTATGACTGCATTGCTGGTCTCACCAAGTTCGTCGCTGTCCCATCAACACGCTCTGGCTCCTTTTAG 456 0.5088 MDATCSRTTRSFAQGVLVFLVITCVAAGSQPRNILVGDSQGWLAGTNYTEWAIQNSPFHINDTLVFKYPPPGNSTVAQSVYLLPNLWNYITCEFRGAKLLGSATEGAGEGFKVELNQPRPYYFASAEGNAYDCIAGLTKFVAVPSTRSGSF 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3829 151 PANTHER GLYCINE-RICH PROTEIN-LIKE 10 148 - -
Ssu1g3829 151 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 10 148 - -
Ssu1g3829 151 ProSiteProfiles Phytocyanin domain profile. 32 146 IPR003245 GO:0009055
Ssu1g3829 151 Gene3D - 30 145 IPR008972 -
Ssu1g3829 151 SUPERFAMILY Cupredoxins 32 143 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3829 Ssu-Chr1 95466780 95467481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3829 5 125 Phytocyanin Superfamily AT3G01070 30.579 3.67e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3829 - - gmx:100810439 239.58