Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3771 ATGGAGTGCAATACCACCAAAATATCTTCATTCCAGTCATTATCAGCACTTGTTTGGAGATCCATAACTCGAGCGCGCTCTGTACCGTACGACCAGAGAACAAGTTGCAAGTTGGCCGCAAACAATCGATCAAGGATGGAACCACCTCTGCCTCAGGAATACTTTGGAAACTCGTTTCATGTAGTGAGTGCTGAAGCGACGACAGGGGAGTTACTTGAGAATGGTCTAGGATGGGCAGCATGGAAGTTGCACTTGGCTGTTACAAACCATAACGACAGAGCTGTTTTGCAATTTCTCCATGAGTGGTTAGAGTCTCCTTTCATATGTCAACTTGGTCGTTTCTTTGACCCGTACTGTGTGATGATGGGTGGCTCACCCATGTTCAATGTGTATGGGAATGAATTTGGAATGGGAAAAGCGGTGGCGGCTAGAGGTGGGTATTGCAATTTGATGGGAAAGTGA 462 0.4632 MECNTTKISSFQSLSALVWRSITRARSVPYDQRTSCKLAANNRSRMEPPLPQEYFGNSFHVVSAEATTGELLENGLGWAAWKLHLAVTNHNDRAVLQFLHEWLESPFICQLGRFFDPYCVMMGGSPMFNVYGNEFGMGKAVAARGGYCNLMGK 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3771 153 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 149 - -
Ssu1g3771 153 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 149 - -
Ssu1g3771 153 Pfam Transferase family 5 147 - -
Ssu1g3771 153 Gene3D - 1 153 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3771 Ssu-Chr1 94659579 94660040 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3771 2 141 Monolignol Biosynthesis Gene Families AT5G48930 31.469 6.05e-17 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3771 - - gmx:100775661 262.692