Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3726 ATGGCCGAACGAAGAGTTTTCACCCTCTCACAGGTTGCCCAACACAAATCCAACAAAGACTGTTGGGTGGTGATCAATGGCAGAGTGTTGGACGTGACAAAGTTCTTGGAGGAACACCCGGGAGGGGAAGAGGTGATTCTAGAGGTAGCTGGGAAGGATGCGACAAAGGAGTTTGATGTTATTGGACACAGCAAAGCAGCGCAAAACATGGTCGTCAAGTACCAAGTGGGTGTCGTCCAAGGTGCCACAGTTAAAGAGGTAGATTTCAAGGATGTTGTGGACAAGGAATCCAACACCAAAGAGATGAGTGCCTTTGTGATCAAAGAGGATGCCAGGTCTATGTCCCTCGCATTTTATGACTTCTTTGTTCCATTCCTTGTTGCTGGTGCCTACTTTGGTTACCGATGCCTCACCAGAGCAGCCTCCATCACTTACTAG 438 0.484 MAERRVFTLSQVAQHKSNKDCWVVINGRVLDVTKFLEEHPGGEEVILEVAGKDATKEFDVIGHSKAAQNMVVKYQVGVVQGATVKEVDFKDVVDKESNTKEMSAFVIKEDARSMSLAFYDFFVPFLVAGAYFGYRCLTRAASITY 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3726 145 SMART Cyt_b5_2 7 80 IPR001199 -
Ssu1g3726 145 Gene3D - 1 86 IPR036400 -
Ssu1g3726 145 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 3 84 IPR036400 -
Ssu1g3726 145 Pfam Cytochrome b5-like Heme/Steroid binding domain 8 79 IPR001199 -
Ssu1g3726 145 PRINTS Cytochrome B5 signature 29 39 IPR001199 -
Ssu1g3726 145 PRINTS Cytochrome B5 signature 54 61 IPR001199 -
Ssu1g3726 145 PRINTS Cytochrome B5 signature 39 53 IPR001199 -
Ssu1g3726 145 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Ssu1g3726 145 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 35 42 IPR018506 GO:0020037
Ssu1g3726 145 PANTHER CYTOCHROME B5 1 140 - -
Ssu1g3726 145 PANTHER CYTOCHROME B5-LIKE 1 140 - -
Ssu1g3726 145 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 4 80 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3726 Ssu-Chr1 93618288 93618956 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3726 2 139 NADPH P450 reductases AT5G48810 43.478 1.99e-36 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3726 - - ccaj:109797704 250.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3726 1 93618288 93618956 Ssu1g3726 1 93618288 93618956 ECH