Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3716 ATGCGGCTTGTATGTTGCTCCAATTCGTCGTTTGGGTCAGCCGCCACTGCCACTCTCCCCTCTTTACCCTGTCCTAGATTCCCTACACTGATCGCAAATTCAACAAAATCGTCCTCGATCCGCTTTCTAAGTTCTCGACCCCTCCGCTCCACTGCTTCCtCGAGTACCTCGCGACAAGTTACGAGAATGGCTTCCAAAAATGCTCAAGATCAAGACCCGCGCTTAGAGAGAATCTCCTCTGCAATCCGAGTCATCCCCGACTTTCCTAAGCCAGGAATTATGTTTCAGGATATAACCACACTGCTTCTTGATACCGAGGCTTTCAAAGACACGATTGACTTGTTTGTTGAGAGGTACAAGGATCAAAATATTTCTGTTGTCGCAGGCATTGAAGCAAGAGGCTTTATATTTGGTCCACCAATTGCATTAGCTATTGGAGCAAAATTTGTCCCCATGAGGAAACCCAATAAATTGCCAGGGGAGGTTATCTCAGAAGAGTATTCTTTGGAGTATGGAACAGACATAATGGAGATGCATGTAGGGGCTGTACAACCTGGAGATCGAGCCTTAATCATAGATGATCTTATTGCCACTGGGGGAACGTTAGGTGCTGCAATTAAGCTACTAGAACGTGTTGGGGTGCATGTTGTGGAGTGTGCTTGTGTGATTGAATTACCAGAGTTGAAGGGGCGGGAAAAGCTGGGAGGCAAGTCGCTATTTGTCTTAGTTAAAGGGGCAGCCTGA 744 0.4677 MRLVCCSNSSFGSAATATLPSLPCPRFPTLIANSTKSSSIRFLSSRPLRSTASSSTSRQVTRMASKNAQDQDPRLERISSAIRVIPDFPKPGIMFQDITTLLLDTEAFKDTIDLFVERYKDQNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPNKLPGEVISEEYSLEYGTDIMEMHVGAVQPGDRALIIDDLIATGGTLGAAIKLLERVGVHVVECACVIELPELKGREKLGGKSLFVLVKGAA 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3716 247 MobiDBLite consensus disorder prediction 49 72 - -
Ssu1g3716 247 TIGRFAM apt: adenine phosphoribosyltransferase 79 243 IPR005764 GO:0003999|GO:0005737|GO:0006168
Ssu1g3716 247 PANTHER ADENINE PHOSPHORIBOSYL TRANSFERASE, PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN-RELATED 66 244 - -
Ssu1g3716 247 MobiDBLite consensus disorder prediction 49 68 - -
Ssu1g3716 247 SUPERFAMILY PRTase-like 80 237 IPR029057 -
Ssu1g3716 247 CDD PRTases_typeI 112 244 IPR000836 -
Ssu1g3716 247 Gene3D - 65 244 IPR029057 -
Ssu1g3716 247 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 66 244 - -
Ssu1g3716 247 Hamap Adenine phosphoribosyltransferase [apt]. 78 245 IPR005764 GO:0003999|GO:0005737|GO:0006168
Ssu1g3716 247 Pfam Phosphoribosyl transferase domain 109 230 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3716 Ssu-Chr1 93462143 93467789 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3716 63 247 PRT Gene Family AT1G27450 83.243 3.24e-111 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3716 K00759 - gmx:100777103 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3716 1 93462143 93467789 Ssu1g3716 1 93462143 93467789 ECH