Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3651 ATGGGTATCTGTATATCCTCTGAATCTTCAGCGATTCATGGAGCGCCCGAAGAAGCTCGTGGTGAAAATGTATTAGTGTTTGAAGCAAGCAAGGTTCAAAGTGAAACTCGGGGACTTTGCTCTGCTTACTCTAAACAAGGTAGCAAAGGACTCAACCAAGATGCTGCCACTCTTCGTCAGGGTTATGGGACAGAAGACGCAGCATTTTGTGGCGTTTTTGATGGGCATGGAAGGAATGGTCACATAGTAAGCAAAATAGGTAAACAGCCGTTTGAATTCACTGATACTGAACCAAAAGAAAGTGCATGCAAAGTTTGA 318 0.4371 MGICISSESSAIHGAPEEARGENVLVFEASKVQSETRGLCSAYSKQGSKGLNQDAATLRQGYGTEDAAFCGVFDGHGRNGHIVSKIGKQPFEFTDTEPKESACKV 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3651 105 SUPERFAMILY PP2C-like 39 87 IPR036457 -
Ssu1g3651 105 Gene3D - 25 98 IPR036457 -
Ssu1g3651 105 PANTHER ALPHABET, ISOFORM E-RELATED 1 87 - -
Ssu1g3651 105 PANTHER PROTEIN PHOSPHATASE 2C 72-RELATED 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3651 Ssu-Chr1 92137817 92138251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3651 1 86 PP2C-type Phosphatase Gene Family AT5G26010 48.889 7.62e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3651 - - gmx:100795893 150.984