Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3633 ATGACGAGCTCAAGCTGCGAAGGCGCGGAGATGGAGCTGTGCCGAGACGAGTCGGCCGCATTGGTCCTCAAGTTCGTCGCCATCGCCTCCATTCTCCTGGCCGGGATGGCCGGGATCGCCATCCCGCTCGTCGGAAAGCACCGCCGCTTCCTCCGGACTGACGGCAACCTCTTCGTGGCGGCGAAGGCGTTCGCGGCGGGGGTGATTCTGGCCACGGGGTTCGTCCACATGCTCTCCGACGCGTGGGAAGCGCTCCACCACCCGTGCTTGCCCTCGTACCCGTGGTCCAAGTTTCCCTTCACCGGCTTCTTCGCCATGATGGCCGCGCTCTTCACGCTCCTCCTCGATTTCGTCGGAACGCAATACTACGAGCGCAAGCAGGGGCTGAACCGCGCCTCCGAAGAAGAATCCCGGGTCGGGTCCTCCGAACCCGCGGGGAAGTTGTTCGGGGAAGAGGAAAGCGGCGGAATGCACATCGTGGGGATGCATGCACATGCGGCGCATCATAGACATAACCACCCCCATGGCCATGACGCATGTCATGGCATTGGCAGCATCAAGGAACAAGCCCACGCCCACGCCACGCCCACGGACACGTCCACTCCCACATCGACGATGCGGAAGAAACTGACGTCCGACACGTCGTCGTTTCGCagACAACGTGGGTACACGTGTGCATTGCAGGTGTTGGAGCTTGGGATCGTGTCACATTCAGTTATAATTGGGTTGTCCTTAGGGGTTTCTCAAAGTCCTTGTACCATAAGGCCTCTGATTGCGGCGTTATCTTTCCATCAGTTTTTTGAAGGGTTTGCGCTTGGAGGGTGCATTTCTCAAGCACAGTTTGAAGCCTCCTCGGCGACAATAATGGCTTGTTTTTTTGCACTGACGACACCCGTGGGTGTTGCCATTGGGACGGCCATTTCTTCGGGGTATAACCCTTACAGCCCCGGTGCACTCATTACAGAAGGTGTCTTGGATTCCCTGTCGGCGGGGATTTTGGTCTATATGGCTTTGGTAGATTTGATAGCTGCGGATTTTCTTAGCAAGAGGATGAGTTGTAACTTTAGGCTGCAGATAGTGTCTTACTGCATGCTTTTCCTTGGGGCTGGGTTGATGTCTTCGCTCGCGATTTGGGCGTGA 1140 0.5702 MTSSSCEGAEMELCRDESAALVLKFVAIASILLAGMAGIAIPLVGKHRRFLRTDGNLFVAAKAFAAGVILATGFVHMLSDAWEALHHPCLPSYPWSKFPFTGFFAMMAALFTLLLDFVGTQYYERKQGLNRASEEESRVGSSEPAGKLFGEEESGGMHIVGMHAHAAHHRHNHPHGHDACHGIGSIKEQAHAHATPTDTSTPTSTMRKKLTSDTSSFRRQRGYTCALQVLELGIVSHSVIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFEASSATIMACFFALTTPVGVAIGTAISSGYNPYSPGALITEGVLDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQIVSYCMLFLGAGLMSSLAIWA 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3633 379 TIGRFAM zip: ZIP zinc/iron transport family 6 379 IPR004698 GO:0005385|GO:0016021|GO:0071577
Ssu1g3633 379 MobiDBLite consensus disorder prediction 192 213 - -
Ssu1g3633 379 MobiDBLite consensus disorder prediction 188 213 - -
Ssu1g3633 379 Pfam ZIP Zinc transporter 23 376 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Ssu1g3633 379 PANTHER ZINC/IRON TRANSPORTER 1 379 - -
Ssu1g3633 379 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 1 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3633 Ssu-Chr1 91940068 91941273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3633 2 379 Inorganic Solute Cotransporters AT1G60960 66.835 7.51e-172 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3633 K14709 - gmx:100812212 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0405 5 8495006 8498668 Ssu1g3633 1 91940068 91941273 PCT