Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3626 ATGGTATTCATGGATTTGGAATGGTTGTTTCCAATTCCAAGTGTTCCTTCTGCTTCAGCAATGTTCACCCTGCTTGCTTTAATAGGAGGATTGTTGGTTTATCTGTATGCACCCTATTGGGGGGTAAGGAAGGTTCCAGGCCCACCATCTCTGCCCCTTGTAGGACACCTTCCCTTGCTGGCTAAGTATGGCCCCGATGTGTTCTCAGTCCTCGCCAAGCAATATGGTCCAATTTACAGATTCCATATGGGAAGACAGCCACTAATAATTATAGCAGATGCAGAGCTTTGTAAAGAGGctggaataaaaaaattcaaagacatTACAAACAGAAGTATTCCCTCACCAATTTCGGCTTCCCCTCTTCACCAAAAGGGCCTCTTCTTCAGCCGGGATTCACAGTGGTCTACCATGCGAAACACCATATTGTCGATGTACCAGCCATCACACTTATCCAGATTAGTGCCAACAATGCAGTCATTCATAGAATCTGCGACCCAAAACCTTGACTCTCAAAAAGAAGACATTATTTTTTCCAACCTGTCCCTAAGACTAGCAACCGACGTGATTGGACAGGCTGCATTTGGTGTCAACTTTGGCCTCTCTAGGCCCCATTCAGTTTGTGATTCTATCAAGAGTGTTAACAATAACGCAAGTGCTACTAATGATACTGAAGTATCAGATTTCATCAACCAACACATATACTCCACAACCCAACTTAAGATGGACTTGTCTGGTTCCTTATCCATTATATTGGGTCTGCTTGTTCCAATACTACAGGAGCCGTTTAGGCAGATTCTGAAGAGAATTCCGGGCACCAAGGACTGGAAGATTGAACGTACCAATAAGAAACTAACTGGGCGTCTTGATGAGATAGtagaaaagagaatgaaagataGGACCCGAAGTTCCAAGGATTTCTTGTCACTCATACTTAATGCCAGAGAAACAAAAGCGGTTTCGGAGAATGTGTTCACGCCTGACTACATAAGTGCCGTTACTTACGAGCACCTACTTGCTGGCTCAGCAACCACCTCCTTTACCTTGTCTTCTGCTGTCTATTTGGTTGCTGGACATCCTCAAGTTGAGAAAAAATTGCTTGATGAAATTGATGCGTTTGGTCCTGTGGATCAGACACCCACTTCTCAAGATCTTCATGACAAGTTTCCTTACCTTGATCAGGTGATCAAAGAGGCCATGAGGTTTTACACAGTATCCCCATTAGTTGCAAGAGAAACATCAAATGAAGTAGAGATTGGAGGCTATCTTCTTCCAAAGGGGACTTGGGTCTGGTTAGCGCTTGGGGTTGTAGCAAAAGATCCCAGAAACTTTCCAGAGCCAGAAAAGTTCAAACCAGAGAGGTTTGACCCCAACTGTGAAGAAACGAAACGAAGGCATCCTTATGCTTTTATACCATTCGGAATTGGTCCTCGGGCTTGCATTGGTCAGAAATTTTCCCTACAAGAGATCAAGCTTTCTCTGATTCATTTATATCGAAAATACTTGTTTCGGCATTCACCCAACATGGAAAACCCCTTAGAACTCGAGTATGGGATAGTCCTCAACTTCAAGTATGGGGTCAAGCTCAGAGCCATGAAAAGAACCCAGAGTTGCTAA 1617 0.4292 MVFMDLEWLFPIPSVPSASAMFTLLALIGGLLVYLYAPYWGVRKVPGPPSLPLVGHLPLLAKYGPDVFSVLAKQYGPIYRFHMGRQPLIIIADAELCKEAGIKKFKDITNRSIPSPISASPLHQKGLFFSRDSQWSTMRNTILSMYQPSHLSRLVPTMQSFIESATQNLDSQKEDIIFSNLSLRLATDVIGQAAFGVNFGLSRPHSVCDSIKSVNNNASATNDTEVSDFINQHIYSTTQLKMDLSGSLSIILGLLVPILQEPFRQILKRIPGTKDWKIERTNKKLTGRLDEIVEKRMKDRTRSSKDFLSLILNARETKAVSENVFTPDYISAVTYEHLLAGSATTSFTLSSAVYLVAGHPQVEKKLLDEIDAFGPVDQTPTSQDLHDKFPYLDQVIKEAMRFYTVSPLVARETSNEVEIGGYLLPKGTWVWLALGVVAKDPRNFPEPEKFKPERFDPNCEETKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIHLYRKYLFRHSPNMENPLELEYGIVLNFKYGVKLRAMKRTQSC 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3626 538 Pfam Cytochrome P450 46 521 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3626 538 SUPERFAMILY Cytochrome P450 38 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3626 538 Gene3D Cytochrome P450 33 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3626 538 PANTHER THROMBOXANE-A SYNTHASE 14 535 - -
Ssu1g3626 538 PRINTS E-class P450 group I signature 393 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3626 538 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3626 538 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3626 538 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3626 538 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3626 538 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3626 538 PRINTS E-class P450 group I signature 329 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3626 538 PRINTS E-class P450 group I signature 433 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3626 538 PANTHER CYTOCHROME P450 FAMILY PROTEIN 14 535 - -
Ssu1g3626 538 PRINTS P450 superfamily signature 394 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3626 538 PRINTS P450 superfamily signature 480 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3626 538 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3626 538 PRINTS P450 superfamily signature 340 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g3626 538 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3626 Ssu-Chr1 91764495 91773850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3626 83 534 Cytochrome P450 AT2G26170 73.894 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3626 K20771 - gmx:100797803 993.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0419 5 8705953 8716054 Ssu1g3626 1 91764495 91773850 PCT