Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3609 ATGACAGATAAAAATCCAAGACCACCAGATTCACATGACAGTGGTTTCACCAACCAATGGCCTCTGGAGCCCTCTGAGTActtgaattttgatgatgatCAATGGCCAGATGATGACCCGGATTCATTTGTTTCCGGGCATGTCCTCAGCCAGGACAATCAAGTCAATGAAGTTGGTGACTTTGGAGGAAGTGACAGCCACTTTGAGGGGTCTTCTAGCGGAAACGTTGACAATGAACGTGAGAAGAAGGAAGTCAGGGATAGAGTTGCATTCAAAACAAAGACACAGGTAGAAATAATGGACGACGGGTTCAAGTGGAGGAAGTACGGAAAAAAGATGGTGAAAAACAGCCCCTATCCAAGGAACTACTATAGGTGTTCAGTGGGCGGATGCCCGGTGAAAAAAAGAGTGGAAAGAGATAAGGAAGATCCAAGGTGA 438 0.4429 MTDKNPRPPDSHDSGFTNQWPLEPSEYLNFDDDQWPDDDPDSFVSGHVLSQDNQVNEVGDFGGSDSHFEGSSSGNVDNEREKKEVRDRVAFKTKTQVEIMDDGFKWRKYGKKMVKNSPYPRNYYRCSVGGCPVKKRVERDKEDPR 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3609 145 MobiDBLite consensus disorder prediction 1 40 - -
Ssu1g3609 145 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 11 143 IPR044810 GO:0003700
Ssu1g3609 145 SMART WRKY_cls 100 145 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ssu1g3609 145 SUPERFAMILY WRKY DNA-binding domain 93 144 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ssu1g3609 145 Gene3D WRKY domain 87 145 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ssu1g3609 145 MobiDBLite consensus disorder prediction 57 73 - -
Ssu1g3609 145 ProSiteProfiles WRKY domain profile. 95 145 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ssu1g3609 145 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 11 143 - -
Ssu1g3609 145 MobiDBLite consensus disorder prediction 57 84 - -
Ssu1g3609 145 Pfam WRKY DNA -binding domain 101 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3609 Ssu-Chr1 91493664 91494781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3609 33 144 WRKY Transcription Factor Family AT5G26170 53.906 5.06e-37 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ssu1g3609 WRKY 1.5e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3609 - - gmx:100819462 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3609 1 91493664 91494781 Ssu1g3609 1 91493664 91494781 ECH