Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3596 ATGAACTTCAGTAACAGCCCTCGTACTCAGCAGAACCTCTCTCGGCAGTCATCAAAGTCAAATATGGGAGTGAAGCAAGAGGCAGCTGCTAGCCCTCTCCCGAGTGGATGCTGTCGAGGCTTCAGCAGCGTTAGGACTGTGTCATCCACGGTACCAACCTTGCAACAGCATCAGCTCCAGCAGCGTTATGAAAGATTAGAAGTACAGGAAAAGAATGGAAAGAACACAAGATTACTTAAGATGCTGTCTCCAAATAGCACAGAGAATGGAATCTTGGACCTCATTATCCAGTCCAAGGGTGAACTTTCACAATCTCCCCCTCTCTCTGTACCATCAACTCCACTATCACCACTCCTCATCCACTCCTTCGCATCACCACCCAATCTAGCGGCCATCACTGATCAAGCCAAAATCAATGGATGGTATATTAATCCAAGTGAGATTCAATTGGGAGAAAAAATAGGACAGGGAAGCACGGCAGACATTCATAGAGGGACATGGCGCGGATTTGATGTGGCGGTGAAGTGCATGTCCGCTGCATTCTTCCGCACAAATGTAAACGGTGTCGTATTCTTCGCTCAGGAGCTTGAAACTCTCTCGAAGCAGCGGCACCGGTTTGTGCTTCACCTCATGGGTGCGTGCCTTGAGCCTCCGCATCATGCATGGGTGGTTACCGAGTATCTGAACACCACGCTGAAGGAGTGGCTACATGGGCCAGGCAAAAGGCCCAGAGACAGAACTGTGCCACTTCCTCCCTTCAAAGACAGGGTGATGCGGGCCGTAGAAATAGCCCAAGCCATGCAGTATCTCCATGAGCAAAAGCCCAAAGTCATTCATCGTGACCTGAAGCCCAGCAACATCTTCTTGGACGATGCCTTGCATGTTAGAGTTGCGGATTTTGGACATGCTCGCTTCTTGGATGATGACGAAATGGCTCTCACCGGAGAAACAGGCAAGCGAACATACGTGTATATGGCACCGGAGGTAATCCGATGTGAGCCCtataatgaaaaatgtgatgTATACAGTTTTGGAATCATACTGAACGAGCTACTTACTGGAAAATACCCTTATATTGAGACAGAATTTGGTCTCGCCAAGATTGCTATGGAAGTTATGGAGGGCAAGCTAAGGCCTGTGCTTCCGTCAAGGGACAATGGTGAGCAACTGGGAGAGCTGATTGACCTGGTATGCCTTTGCTGGGATGCAAATCCATACACTCGACCATCCTTCGCAACAATTAACAGTAGCCTCAAAAGCTACGCCAAGAGGGTCctccaaatttcaaattag 1293 0.4787 MNFSNSPRTQQNLSRQSSKSNMGVKQEAAASPLPSGCCRGFSSVRTVSSTVPTLQQHQLQQRYERLEVQEKNGKNTRLLKMLSPNSTENGILDLIIQSKGELSQSPPLSVPSTPLSPLLIHSFASPPNLAAITDQAKINGWYINPSEIQLGEKIGQGSTADIHRGTWRGFDVAVKCMSAAFFRTNVNGVVFFAQELETLSKQRHRFVLHLMGACLEPPHHAWVVTEYLNTTLKEWLHGPGKRPRDRTVPLPPFKDRVMRAVEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDALHVRVADFGHARFLDDDEMALTGETGKRTYVYMAPEVIRCEPYNEKCDVYSFGIILNELLTGKYPYIETEFGLAKIAMEVMEGKLRPVLPSRDNGEQLGELIDLVCLCWDANPYTRPSFATINSSLKSYAKRVLQISN 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3596 430 ProSitePatterns Protein kinases ATP-binding region signature. 154 175 IPR017441 GO:0005524
Ssu1g3596 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
Ssu1g3596 430 PANTHER OS09G0443600 PROTEIN 26 425 - -
Ssu1g3596 430 MobiDBLite consensus disorder prediction 1 35 - -
Ssu1g3596 430 Pfam Protein tyrosine and serine/threonine kinase 148 418 IPR001245 GO:0004672|GO:0006468
Ssu1g3596 430 MobiDBLite consensus disorder prediction 1 25 - -
Ssu1g3596 430 SMART serkin_6 148 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu1g3596 430 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 26 425 - -
Ssu1g3596 430 SUPERFAMILY Protein kinase-like (PK-like) 122 415 IPR011009 -
Ssu1g3596 430 Gene3D Phosphorylase Kinase; domain 1 130 228 - -
Ssu1g3596 430 Gene3D Transferase(Phosphotransferase) domain 1 229 428 - -
Ssu1g3596 430 ProSiteProfiles Protein kinase domain profile. 148 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu1g3596 430 CDD STKc_MAP3K-like 154 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3596 Ssu-Chr1 91328381 91334891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3596 143 424 MAP Kinase Kinase Kinase AT4G23050 34.589 4.21e-44 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Ssu1g3596 PK_Tyr_Ser-Thr 6.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3596 - - gmx:100810435 671.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3596 1 91328381 91334891 Ssu1g3596 1 91328381 91334891 ECH