Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3595 ATGGATGCTAATAATAAGCAGCAAAGTCCGAAAGGCGGCGAAGTAAGCATGGCGGAGAAGAAAAGGGAAGTGGTGGTGGCGATTCCAAACGAGGGTGGTGATGAATCTTTGATGTCAAAGCAGCAGAGCAGGGTGAATTCGCCGCACAGAATATGCAACGACAACGAGGTTGCTCCAAAGTCGCCACCTTTGAACTGTGCTTCCCCTGAGATAAGGTTCATGCCGAGCCCAAACAAGCCCCCAAAAGTTCCCACTTCCAATGCCAACCTTACCCGGAGAAAATCACTCACAAGGTCAGTGTATTCCAAACCCAAATCAAGGTTTGGTGAACAACCTTACCCCATTGATGGGACCCTTATGGAAGAGAATGGCACCTCAACCTTGCAAGAACAATTGACTGTTAGTTCGTCATGTAAAGCATCGCCTAACAAACCTGGGACTGTTAATAGAACAGTCTCCATCCATTCTGTTATCACTCCCAGGACGCCGTTGATGGCGTCTCCGGGCCAGCCGGGGAGGATTTTGATGAAATCATTTACAAGAAAGTTGAATTGA 555 0.4793 MDANNKQQSPKGGEVSMAEKKREVVVAIPNEGGDESLMSKQQSRVNSPHRICNDNEVAPKSPPLNCASPEIRFMPSPNKPPKVPTSNANLTRRKSLTRSVYSKPKSRFGEQPYPIDGTLMEENGTSTLQEQLTVSSSCKASPNKPGTVNRTVSIHSVITPRTPLMASPGQPGRILMKSFTRKLN 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3595 184 MobiDBLite consensus disorder prediction 35 50 - -
Ssu1g3595 184 MobiDBLite consensus disorder prediction 83 104 - -
Ssu1g3595 184 MobiDBLite consensus disorder prediction 1 116 - -
Ssu1g3595 184 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 9 19 152 - -
Ssu1g3595 184 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 19 152 IPR016688 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3595 17 153 Mechanosensitive Ion Channel Family AT5G19520 40.268 2.83e-18 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3595 K22048 - gmx:100803107 273.092