Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3553 ATGGCACCCGCAGCCACGTCATCATTAACAAGTCCTCCGCGGTCGACATGGCACTCTCCGGTTCCGTACCTTTTTGGAGGACTGGCTGCCATGCTGGGTCTCATAGCGTTTGCGCTGCTGATCCTGGCTTGCTCCTACTGGAAACTTTCCGGTCAGTTACAGAGCGAAGAAAACGCCGAAAGGGACATAGAGAGCGTCGGTGGTGAGAAACAGGGTGACTCTGCCAACAAGGATCCCGTTAAGGTCTATGAGGAGAAGATTCTCGTCATTATGGCTGGAGACGAGAAACCCACATTCTTGGCCACCCCCAAGTCCTCGTTTTCTACTCATGGAGTTCCCAACCATTCTGACAAGAACCTCCAAAACCACGTGAATTCCGAGAAGTCTGAGAAAGAAATGGAGAACCATCTTCAACAACCTGCGTCTCCACAGCCCCAAGAAACGCAACAACAGAGCCAGCGACAAAGAGAGAGTTTGGCTGTTTCATGTAATTCTGTGATTCTATCATAG 510 0.5059 MAPAATSSLTSPPRSTWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGQLQSEENAERDIESVGGEKQGDSANKDPVKVYEEKILVIMAGDEKPTFLATPKSSFSTHGVPNHSDKNLQNHVNSEKSEKEMENHLQQPASPQPQETQQQSQRQRESLAVSCNSVILS 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3553 169 MobiDBLite consensus disorder prediction 101 120 - -
Ssu1g3553 169 MobiDBLite consensus disorder prediction 121 135 - -
Ssu1g3553 169 MobiDBLite consensus disorder prediction 136 169 - -
Ssu1g3553 169 MobiDBLite consensus disorder prediction 100 169 - -
Ssu1g3553 169 PANTHER PROTEIN GLUTAMINE DUMPER 2 6 152 - -
Ssu1g3553 169 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 6 152 IPR040359 GO:0080143
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3553 Ssu-Chr1 90469673 90470182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3553 7 109 Glutamine Dumper (GDU) Family AT5G57685 60.952 1.84e-36 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3553 - - pvu:PHAVU_009G085200g 196.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3553 1 90469673 90470182 Ssu1g3553 1 90469673 90470182 ECH