Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3547 ATGCTGTTGAGCGAGCAGGACAAAGAGAAGAGGAGGATGTTGAAAGAAGAATGGGACAGATGGGTCAAGCATGAAGAAGAGAAGCTACAGAGACAGAAGCTTAGGGATGGAGAAGCTAGTGATGAAGAGGAGGAATATGAGGCCaaggaaattgaaattgaagagTGGATGATGTCAGGGAGGAGGTCGTTCCACTACCACTATGGCCAAGAATGA 216 0.4352 MLLSEQDKEKRRMLKEEWDRWVKHEEEKLQRQKLRDGEASDEEEEYEAKEIEIEEWMMSGRRSFHYHYGQE 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3547 71 Coils Coil 39 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3547 Ssu-Chr1 90366504 90366719 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3547 1 57 Eukaryotic Initiation Factors Gene Family AT5G27640 65.079 1.24e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3547 K03253 - gmx:100817394 91.2781