Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3544 ATGGAGACAAGAACGGGAATTCTTTCCATAGCaatctcttctctttttatgttttcttttgttacCCTTGTTAAGGGTAGCCTCTCTTTCAACTTCTATGCAGATTCTTGCCCATCAGCAGAGTTTATCGTAAGAGACACAGTCAGCTCATCCTCTTCTACTGATCCTTCCATTCCTGGAAAGCTCCTTCGCTTGGTTTTCCATGATTGCTTTGTGGAGGGATGTGATGCGTCTTTGATGCTACAAGGGAACAATACAGAACAAACTGATCCAGGAAATAGGTCTGTTGGAGGATTTTCAGTTATAGATTCAGCAAAAAGAGTCCTTGAGAAATTCTGCCCTGGAACTGTTTCTTGTGCAGACATAATAGCTCTAGCTGCTAGAGATGCTGTTGAAATAGCTGGTGGACCAAGGACTATGATTCCAACAGGTAGGAGAGATGGGATTGTTTCAGTTGCTTCAAATGTCAGACCCAACATTGTGGACACCAGTTTTTCAATGGATGAGATGCTTAAACTCTTTGCCACAAAAGGATTATCCTTACTTGATCTTGTCGTCCTTTCAGGAGCTCATACCATAGGGACAGCTCATTGCAGCTCATTCAGGGATCGTTTTCAAGAAGATTCAAAGGGAAAGCTTAGGCTCATTGACAAAACCCTTGACAGTGACTATGCTAATGAGCTAATGAAACAATGTCCAGCTGGGGTCCAACCATCTGTAACGGTGAACAATGATCCTGAAACATCTATGGTCTTTGACAACAAATACTACCAAAATCTTCTGGTCCACAAAGGCCTATTCCAGTCAGATTCTGTTTTGTTAAGCAATGATAGCACAAGGAAATTAGTGCAGGATTTTGTAAATGATcaagaacttttttttaaaaattggggtCAGTCGTTCTTGAAGCTCACTAGTGTTGGAGTAAAAACAGGTGACGAGGGAGAAATTCGACGATCTTGTGCATCAACTAATGCATAA 981 0.3955 METRTGILSIAISSLFMFSFVTLVKGSLSFNFYADSCPSAEFIVRDTVSSSSSTDPSIPGKLLRLVFHDCFVEGCDASLMLQGNNTEQTDPGNRSVGGFSVIDSAKRVLEKFCPGTVSCADIIALAARDAVEIAGGPRTMIPTGRRDGIVSVASNVRPNIVDTSFSMDEMLKLFATKGLSLLDLVVLSGAHTIGTAHCSSFRDRFQEDSKGKLRLIDKTLDSDYANELMKQCPAGVQPSVTVNNDPETSMVFDNKYYQNLLVHKGLFQSDSVLLSNDSTRKLVQDFVNDQELFFKNWGQSFLKLTSVGVKTGDEGEIRRSCASTNA 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3544 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Ssu1g3544 326 SUPERFAMILY Heme-dependent peroxidases 28 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu1g3544 326 Gene3D - 31 325 - -
Ssu1g3544 326 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g3544 326 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g3544 326 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g3544 326 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g3544 326 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g3544 326 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g3544 326 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g3544 326 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g3544 326 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g3544 326 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g3544 326 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g3544 326 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g3544 326 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g3544 326 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g3544 326 Pfam Peroxidase 44 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g3544 326 Gene3D Peroxidase, domain 2 161 304 - -
Ssu1g3544 326 PANTHER PEROXIDASE 25-RELATED 18 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g3544 326 CDD secretory_peroxidase 28 321 IPR033905 GO:0004601|GO:0042744
Ssu1g3544 326 PANTHER PEROXIDASE 18-RELATED 18 324 - -
Ssu1g3544 326 ProSiteProfiles Plant heme peroxidase family profile. 27 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3544 Ssu-Chr1 90345391 90347556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3544 15 325 Peroxidase AT4G31760 61.736 5.97e-150 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3544 K00430 K18328 gmx:102664900 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3544 1 90345391 90347556 Ssu1g3544 1 90345391 90347556 ECH