Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3295 ATGAAAAGCCATCAACCGAAACTGAAAACCCAACTATTCTCGTGCGGGTTCTTCCGCCACTGCGCCCAAACCGTTCTGAGCCCCACCGCCAGCACCCCACCCCTCCCTCTCACCCCCCCTCGCTTCCAACAATGCGAATCCTCCacctcctcctcttcctccaCCACTTCCCAGAGCTTCACCCAGTGGAGATTCTCTccccccacccccacccccacccctaacaccaacaacaacaacaacaacctcaTCAAAACAAACACAGACACAAACACAAGCTTtaatccaccaccaccacaaatCCATAACCTCCAAGAACTCTTCCACATTTCAGAACTCCAACTAACCACCGACCCCACCTCCGCCCTCCACCTTCTAGAACGTTCCCTCGTCCCGAACCCTCCCCAAGACCAACCGCCCTGCCCTCCCGACCTCATGCGCGCCCTCATCCGCAACCTCGCCCACGCCAAGCCCGCCACCAAGATCCTCTTCGCCCTCTGCCTCTCCCACGCCAACCGCCGCGTCGCCGTCGAGGCAGGCGCCGTCGCCGCCGTCGTCGAGGCCGCGCCCGAGCTCGACGGCGCCCCGGCCGAGCGCGCCCTCGCCGCGCTCGAGCTCATGTGCACGCTGCCCGACGGCGCCGAGGAGGTCCGGGCCCACGCGCTCGCCGTCCCCGTCATGGTCACCATGATGGGCAAGACCGCCGCGCGAGGGAAGGAGTACGCCATCGGAGTTCTCGCCGTCGTCTACGGCGGCTCCCGGGCGGACCGGCCGACTGCGCCGCCGGAAGAGGTGGCGCGTGCCGTCGAGCTCGCGCTGCAGGGCGAGTGCAGCGCCAGGGGGAGGAGGAAAGGCGCGCAGTTGTTGAAGACGCTGCAACAACTCTCTCAGCCTGAAATTGAAGCCGAGCCTCACGCTCAACACGCCAATTGA 933 0.5895 MKSHQPKLKTQLFSCGFFRHCAQTVLSPTASTPPLPLTPPRFQQCESSTSSSSSTTSQSFTQWRFSPPTPTPTPNTNNNNNNLIKTNTDTNTSFNPPPPQIHNLQELFHISELQLTTDPTSALHLLERSLVPNPPQDQPPCPPDLMRALIRNLAHAKPATKILFALCLSHANRRVAVEAGAVAAVVEAAPELDGAPAERALAALELMCTLPDGAEEVRAHALAVPVMVTMMGKTAARGKEYAIGVLAVVYGGSRADRPTAPPEEVARAVELALQGECSARGRRKGAQLLKTLQQLSQPEIEAEPHAQHAN 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3295 310 Gene3D - 121 308 IPR011989 -
Ssu1g3295 310 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 2 302 - -
Ssu1g3295 310 MobiDBLite consensus disorder prediction 30 102 - -
Ssu1g3295 310 SUPERFAMILY ARM repeat 122 292 IPR016024 -
Ssu1g3295 310 MobiDBLite consensus disorder prediction 75 100 - -
Ssu1g3295 310 MobiDBLite consensus disorder prediction 41 66 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3295 144 310 U-box Gene Family AT1G49780 33.333 4.04e-18 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3295 - - gmx:100814020 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3295 1 85588300 85589232 Ssu1g3295 1 85588300 85589232 ECH