Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3141 atggcaggGGAATCACTAACGTTAATAGGGTTTTGGGGTAGTCCATTTGCCCTCAGGGTCAAGTGGGCTCTAGAACTAAAAGGTATTCGGTACCAATATGTGGAAGAAGATCTCAGCAACAAGAGTGCCATGCTCCTGCAGTATAACCCTGTCTACAAGAAGGTACCGGTTCTGGTGCATGACGGTAAGCCCCTGGCAGAATCACTAGTGATTCTTGAGTATATTGATGAGACCTGGGAGCAAAACCCCCTTCTTTCACATGATCCCTATGAAAAGGCCAAGGCACGATTCTGGTCCAGATTCGTTGATGAAAAGTGTGTGCCAGCTGTTATGGCCACCTTTTCCAAAGGAGGGGAGGAACAACAGAAGGCAGCACAGGAAGCGCGAGAGAATCTAAAGACCCTTGAAGGTGGGATTGAGGGAAAGCGCTACTTTGGAGGTGAAAATATAGGCTTCGCTGATATTGCTATTGGCTGGCTTGGATACTGGGTACGAATAGTGGAGGAAATAGTGGGCATAAACCTTATCGATAAAGAGTTGATGGCTAAGCTTGATGCTTGGATCGATGATTTTCTTGAGCTTCCTGTTATCAAAGAATGCATGCCGCCTCGTGATAAACTGCTCAACCACAACAAGGCCTTCCACAAGCTCTTGACATCTTCATCCACTTAA 672 0.4583 MAGESLTLIGFWGSPFALRVKWALELKGIRYQYVEEDLSNKSAMLLQYNPVYKKVPVLVHDGKPLAESLVILEYIDETWEQNPLLSHDPYEKAKARFWSRFVDEKCVPAVMATFSKGGEEQQKAAQEARENLKTLEGGIEGKRYFGGENIGFADIAIGWLGYWVRIVEEIVGINLIDKELMAKLDAWIDDFLELPVIKECMPPRDKLLNHNKAFHKLLTSSST 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3141 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 214 IPR010987 -
Ssu1g3141 223 SUPERFAMILY GST C-terminal domain-like 77 217 IPR036282 -
Ssu1g3141 223 CDD GST_C_Tau 89 214 IPR045074 GO:0004364|GO:0006749
Ssu1g3141 223 Pfam Glutathione S-transferase, C-terminal domain 108 195 IPR004046 -
Ssu1g3141 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 220 IPR045073 -
Ssu1g3141 223 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Ssu1g3141 223 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Ssu1g3141 223 CDD GST_N_Tau 6 79 - -
Ssu1g3141 223 PANTHER - 4 220 - -
Ssu1g3141 223 SFLD Glutathione Transferase (cytosolic) 2 220 IPR040079 -
Ssu1g3141 223 Gene3D - 85 222 - -
Ssu1g3141 223 SFLD Main.3: Omega- and Tau-like 2 220 IPR045073 -
Ssu1g3141 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Ssu1g3141 223 Gene3D Glutaredoxin 1 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3141 Ssu-Chr1 82280405 82281319 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3141 3 213 Glutathione S-transferase Gene Family AT2G29420 45.972 5.28e-72 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3141 K00799 - gmx:100813267 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3141 1 82280405 82281319 Ssu1g3141 1 82280405 82281319 ECH