Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3036 ATGAGCAAACTCAAAACCCAAAGAAAACCAACCATTACCAAACATGTCagccaaaaccaaaaccaaaaccaagaGCCACAGAAAACAGAAAAACAGCCTTCATGGGTGGTAAGAGGCCTATTGGCTTGTAGGAACGTCCAAATCCAACAACATCAGCAACAACAGAAGGAAGCAAAACCGCCACCAGAAGCAAAAGGACACAGGAAAAAACAGGAGCAGAGAAAGCTGCAAGAGGAACGAGTCCCAGAAGAAAACGGCAAGAAGTGCAAGAAGCTGAAATGCTCAGGCTCGCTTTGTAACAACACTAAGATCACGGCAAAGCCTGACACAGCAGCCCCAGATGTCCACAAGAAAAGGTTGTCGCTGAGTGGATGCAACAACAACGATGCTTCCAGCAGATCCATGAAAGCACCTCTTAACGAACTCAATGGAGTGGTGTCtgcctcttcttcttcattgtCAGCATCTTCAACTTCTTCCGGCGGTGGCTCTTTCAGGGGAATGCCATTCAGGAGACTCTCCGGTTGTTACGAGTGTCGAATGGTGGTAGACCCAGTTCTTGGCTTCACTAGAGACCCTTCTCTGAGGAGCAGCATTTGTTCTTGCCCTGACTGTGGTGAGATCATGAAAGCTGAAAGTCTGGAACATCACCAGGCTGTCAAACATGCAGTTTCTGAACTGGGTCCAGAAGACACCAGCAAGAACATAGTTGAAATAATATTCCACTCCAGCTGGCTGAAGAAGCAGTCTCCAGTGTGCAAAATAGACCGTATCCTTAAGGTCCACAACACTCAGAAGACCATTACCAAATTTGAGGAGTACAGAGACTCCATAAAAGCCAAAGCCACGAGGCTCTCCAAGAAACACCCTCGTTGCATAGCAGATGGCAACGAGCTGCTCAGGTTTCACTGCACCTCCTTTGCGTGCTCCCTCGGCCTAAACGGCTCCTCCAACCTGTGCAACTCAATACCCCAGTGCAACGTGTGCAGCATAATCAAGCACGGGTTCAAGGTCACCGGAGGAAACGGTATCCTGACAACGGCAACAAGTGGGAAGGCTCACGACAAAGCGTGTGTGGATGAGAGTGAGGAGACGATCAGGGCAATGCTGGTTTGTCGGGTGATAGCAGGCAGGGTGAAGAAGAATGCGGAAGGTGGGATGGAGGAGTATGATTCGGTTGCGGGGGCCGTTGGGGCTTATTCTAATTTGGATGAGTTGTTTGTGTTCAACCCGCGAGCTATATTGCCTTGCTTTGTTGTAATCTATAGAGGCTTTTGA 1278 0.4734 MSKLKTQRKPTITKHVSQNQNQNQEPQKTEKQPSWVVRGLLACRNVQIQQHQQQQKEAKPPPEAKGHRKKQEQRKLQEERVPEENGKKCKKLKCSGSLCNNTKITAKPDTAAPDVHKKRLSLSGCNNNDASSRSMKAPLNELNGVVSASSSSLSASSTSSGGGSFRGMPFRRLSGCYECRMVVDPVLGFTRDPSLRSSICSCPDCGEIMKAESLEHHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQKTITKFEEYRDSIKAKATRLSKKHPRCIADGNELLRFHCTSFACSLGLNGSSNLCNSIPQCNVCSIIKHGFKVTGGNGILTTATSGKAHDKACVDESEETIRAMLVCRVIAGRVKKNAEGGMEEYDSVAGAVGAYSNLDELFVFNPRAILPCFVVIYRGF 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3036 425 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 38 423 - -
Ssu1g3036 425 MobiDBLite consensus disorder prediction 11 31 - -
Ssu1g3036 425 MobiDBLite consensus disorder prediction 58 87 - -
Ssu1g3036 425 Gene3D - 223 423 - -
Ssu1g3036 425 SUPERFAMILY ADP-ribosylation 224 424 - -
Ssu1g3036 425 MobiDBLite consensus disorder prediction 1 87 - -
Ssu1g3036 425 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 38 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3036 Ssu-Chr1 79471412 79473050 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3036 165 423 C2H2 Transcription Factor Family AT1G75710 54.266 1.49e-100 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3036 - - gmx:100817333 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3036 1 79471412 79473050 Ssu1g3036 1 79471412 79473050 ECH