Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3014 ATGGAAGAAATATGTTATGCTACTTTTGCTAAGAACTTCACTAAGGCAAAGCCTTATTTGTTAATTGTGGGACTTCAGTTTGGGTTCGCCGGAGCATTCATATTCTCCATGGCCAGCCTCAACCATGGAATGAATCGTTTTGTTTTCGTTGTCTATCGCAATGTCATTGCTGCATTGGCCCTAGCTCCTTTTGCATTGATTTTTGAGAGGAAAATTAGGCCAAAGATGACACTCCCTGTCTTTTTACAGATAATGGCACTCGGATTTGTGGAGCCAGTGATTGATCAAGGATTCACTTTCTTGGGAATGCAATATACGTCGGCTTCGTTTGCCTCTGCTATAATGAATGCCGTGCCCTCTGTCACTTTTGTACTAGCAGTAATTCTAAGGTTAGAGCGTGTAAATGTTAAGAAGGTACGAAGCCTAGCGAAGGTGATTGGGACGTTGGTAACCTTTTCGGGCGCTTTGTTAATGACACTTTACAAAGGCCCTCAAATTAACCTATTTTATTCTCCACACACAACCCACCACCAAGATGGAAGTCACTCCCCTCAGGTTCTCAAACACTGGGTCTCAGggactctctttcttctcctgGGTTGTGTCGCATGGTCAACTTTCTTCATTTTACAGTCCATAACATTGAAAAGGTATCCGGCAGAATTGTCACTCTCTACATTGGTATGCTTCGCGGGTGCTTCGCAAGCTGTCGTTGTGGCATTGGTGGCGACTCGTTACTCTGGGCTGGGGACGTGGGCCTTAGGTTGGGACTTCAGGCTCTACGGTCCTCTCTACACGgGAATAGTTACCTCTGGAATTACGTATTATGTGCAAGGGTTGGTATTGCAAAGCAGAGGCCCGGTATTTTTAACAGCCTTTAATCCCCTTTGCATGATCATAACTTCCGCTTTAGGCTCCTTCCTTTTTGCAGAGCAGCTTCACCTGGGCAGTATTATTGGAGCCATCATTATCGCACTGGGTCTGTATTCTGTGGTGTGGGGCAAAGGCAAAGACTATTCAGACCCCATCATCACCTACAACAAAGCAAACGGAGACTCAACAGCTGCCAATTACCTCGTCTGA 1083 0.446 MEEICYATFAKNFTKAKPYLLIVGLQFGFAGAFIFSMASLNHGMNRFVFVVYRNVIAALALAPFALIFERKIRPKMTLPVFLQIMALGFVEPVIDQGFTFLGMQYTSASFASAIMNAVPSVTFVLAVILRLERVNVKKVRSLAKVIGTLVTFSGALLMTLYKGPQINLFYSPHTTHHQDGSHSPQVLKHWVSGTLFLLLGCVAWSTFFILQSITLKRYPAELSLSTLVCFAGASQAVVVALVATRYSGLGTWALGWDFRLYGPLYTGIVTSGITYYVQGLVLQSRGPVFLTAFNPLCMIITSALGSFLFAEQLHLGSIIGAIIIALGLYSVVWGKGKDYSDPIITYNKANGDSTAANYLV 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3014 360 PANTHER WAT1-RELATED PROTEIN 12 345 - -
Ssu1g3014 360 Pfam EamA-like transporter family 17 159 IPR000620 GO:0016020|GO:0016021
Ssu1g3014 360 Pfam EamA-like transporter family 192 332 IPR000620 GO:0016020|GO:0016021
Ssu1g3014 360 PANTHER WAT1-RELATED PROTEIN 12 345 IPR030184 GO:0016021|GO:0022857
Ssu1g3014 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Ssu1g3014 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3014 Ssu-Chr1 79010847 79019394 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3014 12 338 Nodulin-like Gene Family AT4G08300 51.976 4.70e-126 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3014 - - gmx:100812537 599.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3014 1 79010847 79019394 Ssu1g3014 1 79010847 79019394 ECH