Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2952 ATGCAGTTGTACCATCATCCGTTTGATTTGGACAGCCAGAAGGTGAGACTTGCGTTGGAAGAGAAGGGCATTGATTATACATCTCACCATGTCAATCCCATAACTGGCAAGAACTTGGATTCTTCATTCTTCAAGATGAATCCCAGTGGAAGACTCCCTGTGTTCCAAAATGGCTCTCACATCCTTTACAAGCCTATTGATATAATCCAGTACATAGAAAGAATTGCTGTGTTCTCCTCGGGGTCTGAGAATATCAGTACTAGTAGCAGGGAAGTGATTGAATGGATGCAGAGGATACAAGAGTGGGATGCTAAGTATTTTTCCCTTTTCCATATACCAGAGAAATACAGGATATATGTTTCCAAGTTCTTGCGGCAAGTGGTGATTGCTCGAATGTCTGAGTCTCCAGAATTAGCAGGAGCTTACCATAAGAAGTTAAAAGAAGCCTATCAGACTGAAGAGAAATTGAAAGAGGCAGATGTTTTGAGAAGGAGCAAGGAGCATTTGATTAGGCTGCTTGATGAAGCAGAGAGGCAGCTGAGTGAAACACCTTATTTAGCAGGTCAAGAGTTTACCATGGCTGATGTGATGCTCATTCCAGTGTTGGCTCGTTTAGCACTCTTGGATTTGGAGAATGAGTACATAACTGGCAGGCCAAACATTGCTGAGTATTGGGTTTTGGTTCAGCAGAGGCCTAGTTATAGGAAGGTGATTGGTAGGTATTTTGATGGTTGGAAAAAGCACAAGACATTGTTAAAAACTTGGTGCTTTGTTCGTATTAGAAGTTTGCTGAAGAGGTACTAG 804 0.4204 MQLYHHPFDLDSQKVRLALEEKGIDYTSHHVNPITGKNLDSSFFKMNPSGRLPVFQNGSHILYKPIDIIQYIERIAVFSSGSENISTSSREVIEWMQRIQEWDAKYFSLFHIPEKYRIYVSKFLRQVVIARMSESPELAGAYHKKLKEAYQTEEKLKEADVLRRSKEHLIRLLDEAERQLSETPYLAGQEFTMADVMLIPVLARLALLDLENEYITGRPNIAEYWVLVQQRPSYRKVIGRYFDGWKKHKTLLKTWCFVRIRSLLKRY 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2952 267 CDD GST_N_family 1 73 - -
Ssu1g2952 267 SFLD Glutathione Transferase (cytosolic) 2 225 IPR040079 -
Ssu1g2952 267 CDD GST_C_family 148 225 - -
Ssu1g2952 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Ssu1g2952 267 Gene3D Glutaredoxin 1 94 - -
Ssu1g2952 267 Pfam Glutathione S-transferase, C-terminal domain 161 224 - -
Ssu1g2952 267 Coils Coil 159 179 - -
Ssu1g2952 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Ssu1g2952 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
Ssu1g2952 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 252 IPR010987 -
Ssu1g2952 267 Gene3D - 135 238 - -
Ssu1g2952 267 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Ssu1g2952 267 SUPERFAMILY GST C-terminal domain-like 157 239 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2952 Ssu-Chr1 77628973 77630057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2952 1 267 Glutathione S-transferase Gene Family AT1G77290 69.288 1.61e-143 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2952 K22077 - gmx:100792543 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2952 1 77628973 77630057 Ssu1g2952 1 77628973 77630057 ECH