Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2883 ATGGAGGCTAAGACTAAAATGTCTGAAGTGCTGTCATTCATAGTGATGGTGATTATGGAAGGTTGGACCATAGGGCTGACGATTTTTGCAAAAACTGCAATAACTAATGGAATGAGCCCATTTGTGTTCATTGTTTATACCAATGCTCTGGCTGCTATTATACTGTTCCCTTGTTCCTTTTTATCACACCAAGAGGACAgGATAACCATGACTCAGACCTTTTTATTCCTGGGTCTAAGCTATAGTTCGCCAATACTTGTGTGTGCCATGGGTCACTTGATCCCAACCTTTAATTTTctgctctctctcattctcagACAGTTGAATTTGAGAAGCCCTGCTATCCAAGTCCAAGTAATTGGTATTTTGGTATCAATAATGGGAGCAGCGCTAGCTGAATTCTTCAAAGGACCACCTATAAGACCCTCTTCTCTCCACCTTAGACACACTAAGCAACTTCTTGTCTTCTCTTCAGCACCAGAGTTTTGGGTTCTAGGCGGCGATCTGCTTGCTGCAGCTTCCTTCTCAGTTTCAATTTCGAACTTTATCCAGAAAGAAACCGTCAAGCAATATCCTGAACCAATGAAAGTGCTTTCTTATTCTAGCTTACTAGGGACGATCCTCAGTGCAATAGTCTCATGGATAATGGAGAGGGACATAAATGCTTGGAAGCTAAAGCGTAACAAGGATCTCATTCTCATTGTTTTAACTGCACAAGTTGGGGGTGTAATTCGTCTCAATATTCAGGTATGGTTCACTTGCATGAAGGGTCCACTTTATGTGTCACTTTTCAAGCCCTTTGGTATTGCCTTTGCCACTACTTTTGCAGTTTGCTTCTTTTCTAACAGCCTTCATTATGGAAGGTACTTGGATTCTCTTTCATTTGTTGACCCCAGtGTGATAGGAACAACTGTACTTGGAATGGGCTATTATACAGTAATGAATGGCcaaatcaaagaaaatgaagaagagacAAGCTGTGACGAAAGCGAGGATTCTTCGAACAAGAAGATTCCTCTTTTGCAAGAAAAGATGGAAGTATGA 1044 0.3937 MEAKTKMSEVLSFIVMVIMEGWTIGLTIFAKTAITNGMSPFVFIVYTNALAAIILFPCSFLSHQEDRITMTQTFLFLGLSYSSPILVCAMGHLIPTFNFLLSLILRQLNLRSPAIQVQVIGILVSIMGAALAEFFKGPPIRPSSLHLRHTKQLLVFSSAPEFWVLGGDLLAAASFSVSISNFIQKETVKQYPEPMKVLSYSSLLGTILSAIVSWIMERDINAWKLKRNKDLILIVLTAQVGGVIRLNIQVWFTCMKGPLYVSLFKPFGIAFATTFAVCFFSNSLHYGRYLDSLSFVDPSVIGTTVLGMGYYTVMNGQIKENEEETSCDESEDSSNKKIPLLQEKMEV 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2883 347 MobiDBLite consensus disorder prediction 330 347 - -
Ssu1g2883 347 PANTHER WAT1-RELATED PROTEIN 8 344 - -
Ssu1g2883 347 MobiDBLite consensus disorder prediction 321 347 - -
Ssu1g2883 347 PANTHER WAT1-RELATED PROTEIN 8 344 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2883 Ssu-Chr1 76073881 76076790 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2883 1 346 Nodulin-like Gene Family AT1G70260 45.431 1.34e-103 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2883 - - gmx:100803495 535.028