Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2881 ATGGAGGCTAAGACTAAGATGTCTGAAGTGCTGTCATTCATAGTGATGGTGATTATGGAAGGTTGGACCATAGGGCTGACGATTTTTGCAAAAACTGCAATAACTAATGGAATGAGCCCATTTGTGTTCATTGTTTATACCAATGCTCTGGCTGCTATTATACTGTTCCCTTGTTCCTTTTTATCACACCAAGAGGACAgGATAACCATGACTCAGACCTTTTTATTCCTGGGTCTAAGCTATAGTTCGCCAATACTTGTGTGTGCCATGGGTCACTTGATCCCAACCTTTAACTTTctgctctctctcattctcagGAAGACAAAGTTGAATTTGAGAAGCCCAGCTATCCAAGTCCAAGTGATTGGAATTTTCGTATCAATAATGGGAGCAGTGCTAGCTGAATTCTTCAAGGGACCACTTATAAGACCCTCTTCTCACCACCTTAGACACACCAAGCAATTTCTTGTCTTCTCCTCAGCACCAGAGTTTTGGGTTCTTGGTGGTGTCTTGCTTGCTGCAGCTTTCTTCTCAGTTTCAATTTCGAACTTTATCCAGgcactccttttcttttttaaaccccttttcattttttctctattcttaAAAGCAAGTTTTCCTTTAGAATGA 630 0.3683 MEAKTKMSEVLSFIVMVIMEGWTIGLTIFAKTAITNGMSPFVFIVYTNALAAIILFPCSFLSHQEDRITMTQTFLFLGLSYSSPILVCAMGHLIPTFNFLLSLILRKTKLNLRSPAIQVQVIGIFVSIMGAVLAEFFKGPLIRPSSHHLRHTKQFLVFSSAPEFWVLGGVLLAAAFFSVSISNFIQALLFFFKPLFIFSLFLKASFPLE 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2881 209 PANTHER WAT1-RELATED PROTEIN 8 188 - -
Ssu1g2881 209 PANTHER WAT1-RELATED PROTEIN 8 188 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2881 Ssu-Chr1 76062642 76064827 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2881 1 186 Nodulin-like Gene Family AT1G70260 44.811 4.86e-54 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2881 - - gmx:100803495 319.316