Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2822 ATGAATGAGAAGAGGAATCCAAAGCGTCCAAAATCACTGCCTTTCAAAATGCCTGTGACAGACTCAAATGATCCGCAGAATTTTGATGATAACATTCTTTTCCCGGTTGAAGAGATTGTACAATACCCATTGCCTGGATATGTGTCGCCGACTTCAATAAGTTTTAGTCCTGATGAtagtttaatttcttatttatttagtcCTGATCACTCTTTAAACAGAAAGATTTATGCTTTTGATCTGAAGACCAATACACAAGAATTGTTATTCAGTCCCCCTGATGGTGGACTTGATGAAAGCAATATTTCTCCAGAAGAAAAGTTGAGGAGGGAGAGGTTGAGGGAGCGTGGTTTAGGTGTGACGCGGTATGAATGGATGAAGACAAGCTCAAAAAGGAAAGGAGTCATGGTGCCATTGCCTGCTGGGATTTATATCCAGGACATTTCCCTTTCAAAAGCAGAGCTCAAGCTTCCTAGTGTATCAGGTTCACCCATTATTGATCCACATCTCTCTCCGGATGGATCAATGCTTGCCTATGTAAGAGACTGTGAGTTGCATGTTCTGAATCTCTTGTCTAATGAATCTAAGCAGTTGACCCATGGGGCAAAGGAAAATGGTTTGACTCATGGGCTTGCTGAATATATAGCTCAGGAGGAGATGGATAGAAAAACTGGATATTGGTGGTCACTGGACAGTAAATATATTGCTTTCACTGAAGTTGATTCTTCTGAAATACCACTTTTTAGAATTATGCACCAAGGGAAGAACTCAGTTGGTTTAGAGGCACAGGAAGACCACACTTATCCTTTTGCAGGAGCTTCAAATGTTAAAGTGCGCCTTGGGGTTGTTTCGGTAGTTGGAAGCTCCATTACTTGGATGGATCTTCTCTGCGGGGGCACAGAACAGCAAAACAATGAGGAGGAATATTTGGCAAGAGTTAATTGGATGCATGGAAACATTCTCACTGCTCAGATCTTGAACAGGCACCAcactaaaataaagattattaagTTTGATATTAGAACAggccaaagaaaaaatatattggtGGAAGAAAACAGCAGTTGGATCAATATACATGACTGTTTCACACCTCTTGATAAAGGAGTTACCAAGTTTTCAGGTGGATTTATCTGGGCTAGTGAGAAAACAGGATTTAGACATCTTTATCTTCATGATGCAAATGGGACTTGTTTAGGACCCATCACTGAAGGTGAATGGATGGTTGAGCAAATTGCTGGTGTGAATGAGGCTACAGGTCTGGTATATTTTACTGGGACCTTGGATGGTCCTCTGGAGTCCAATTTATATTGTGCTAAACTTTTTGTTGATGGAAGTCAACCACTTCAGGTCCCTGTCAGACTTACACACAGCAAGGGGAAGCACATTGTGGTCCTTGATCATCATATGCAAAATTTTGTTGATATCCATGATTCTCTTGGTTGTCCTCCTAGGGTGTTACTTTGCTCGCTGGAGGATGGAAGTGTAATCAAGCCTTTATATGAGCAGTCATTTACAATTCCAAGATTTAAAAGGCTTCAACTTGAGCCACCAGAGATTGTTGAAATACAGGCTGATGATGGCACTACATTGTATGGAGCTCTATATAAGCCTGATGCCTCAAGGTTTGGATCTCCACCTTACAAAACTATGATCAATGTTTATGGTGGTCCAAGTGTCCAGCTTGTTAGTAACTCTTGGCTTAGTACAGTAGACCTGAGAGCACAATATTTGAGAAACCAAGGCATCTTAGTTTGGAAGTTAGACAATAGAGGAACTGCGAGACGGGGGTTGAAGTTTGAAAGCTATTTAAAGCACAAACTTGGTCAAATTGATGCTGATGATCAGCTAACTGGAGCAGAGTGGCTTGTCAAACAAGGGCTTGCAAAAGCTGGTCACATTGGGTTGTATGGATGGAGTTATGGCGGGTATCTCTCTGCCATGACACTTTCAAGATATCCAGATTTCTTCAAGTGTGCAATAGCCGGCGCCCCTGTTACATCATGGGATGGATATGACACATTTTACACAGAGAAGTACATGGGATTGCCATCTGAAAACAAGTCAGGATATGAAAGTGGTTGTGTCATGAACCAAGTGCACCAGTTGAAAGGGAGGTTGTTGCTTGTGCATGGCATGATTGatgagaatgttcattttagGCACACTGCAAGGCTTATCAATGCACTTGTGGCAGCTGGAAAACCATATGAGCTAATAATTTTCCCAGATGAAAGGCACATGCCGCGGCATCATAGCGATCGAGTTTACATGGAAGGGAGGATGTGGGACTTCATCCAGAGGAATCTGTAA 2313 0.4086 MNEKRNPKRPKSLPFKMPVTDSNDPQNFDDNILFPVEEIVQYPLPGYVSPTSISFSPDDSLISYLFSPDHSLNRKIYAFDLKTNTQELLFSPPDGGLDESNISPEEKLRRERLRERGLGVTRYEWMKTSSKRKGVMVPLPAGIYIQDISLSKAELKLPSVSGSPIIDPHLSPDGSMLAYVRDCELHVLNLLSNESKQLTHGAKENGLTHGLAEYIAQEEMDRKTGYWWSLDSKYIAFTEVDSSEIPLFRIMHQGKNSVGLEAQEDHTYPFAGASNVKVRLGVVSVVGSSITWMDLLCGGTEQQNNEEEYLARVNWMHGNILTAQILNRHHTKIKIIKFDIRTGQRKNILVEENSSWINIHDCFTPLDKGVTKFSGGFIWASEKTGFRHLYLHDANGTCLGPITEGEWMVEQIAGVNEATGLVYFTGTLDGPLESNLYCAKLFVDGSQPLQVPVRLTHSKGKHIVVLDHHMQNFVDIHDSLGCPPRVLLCSLEDGSVIKPLYEQSFTIPRFKRLQLEPPEIVEIQADDGTTLYGALYKPDASRFGSPPYKTMINVYGGPSVQLVSNSWLSTVDLRAQYLRNQGILVWKLDNRGTARRGLKFESYLKHKLGQIDADDQLTGAEWLVKQGLAKAGHIGLYGWSYGGYLSAMTLSRYPDFFKCAIAGAPVTSWDGYDTFYTEKYMGLPSENKSGYESGCVMNQVHQLKGRLLLVHGMIDENVHFRHTARLINALVAAGKPYELIIFPDERHMPRHHSDRVYMEGRMWDFIQRNL 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2822 770 MobiDBLite consensus disorder prediction 1 24 - -
Ssu1g2822 770 Gene3D - 35 510 - -
Ssu1g2822 770 SUPERFAMILY DPP6 N-terminal domain-like 46 508 - -
Ssu1g2822 770 Gene3D alpha/beta hydrolase 519 770 IPR029058 -
Ssu1g2822 770 Pfam Dipeptidyl peptidase IV (DPP IV) N-terminal region 138 484 IPR002469 GO:0006508
Ssu1g2822 770 PANTHER PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED 32 765 - -
Ssu1g2822 770 Pfam Prolyl oligopeptidase family 571 770 IPR001375 GO:0006508|GO:0008236
Ssu1g2822 770 PANTHER DIPEPTIDYL-PEPTIDASE 4-RELATED 32 765 - -
Ssu1g2822 770 SUPERFAMILY alpha/beta-Hydrolases 517 770 IPR029058 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2822 501 768 Carbohydrate Esterase AT5G36210 23.214 4.77e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2822 K01278 - gmx:100812178 1502.26