Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2781 ATGGCGGCTTTTACGTCAATTGCTGCACAATACTCATCCACATCATCTTTACAATCTTTGGTACCTTCTTTAGAAGCTACACGCGATGGTAATTCGAGGTGGGGGAGAGTGAGATCGTACAAATTCACAGGAAAAAGATCACTCCAACAGAATATCACAAGAGGCTTAACAATCCAGAGTGCAGCCACAAAACCAGCAAAGTCGCCAGCTGAAGAAGATTGGAAGGTTAAGCGAGAATATCTGCTGGAAAAAAGGGTAAGAAGTGTGGATGCAAAGGAAGCTCTGCgccttcaaaaagaaaacaattttgtgattCTCGACGTAAGGCCAGAAGCAGAGTTCAAAGAGGCTCATCCTCCAGATGCTATCAATGTGCAAATATATAGGCTTATAAAAGAGTGGACAGCATGGGACATTGCCAGACGTGCTGCATTTgcattttttggtatttttgcCGGGACTGAAGAGAACCCCGAGTTCATCCAGACTGTTGAagcaaaattagataaaaatgcAAAGATAATAGTAGCTTGCTCGGTAGGAGGTACAATGAAACCATCACAAAACCTGCCTGAAGGTCAACAATCAAgGTCTCTCATAGCAGCTTACTTGCTGGTCCTTAATGGTTATACCAATGTCTTCCATCTCGAAGGTGGTCTTTACTCATGGTTTAAAGAGGATCTGCCAAGTGTTTCCGAGGAGTGA 705 0.4014 MAAFTSIAAQYSSTSSLQSLVPSLEATRDGNSRWGRVRSYKFTGKRSLQQNITRGLTIQSAATKPAKSPAEEDWKVKREYLLEKRVRSVDAKEALRLQKENNFVILDVRPEAEFKEAHPPDAINVQIYRLIKEWTAWDIARRAAFAFFGIFAGTEENPEFIQTVEAKLDKNAKIIVACSVGGTMKPSQNLPEGQQSRSLIAAYLLVLNGYTNVFHLEGGLYSWFKEDLPSVSEE 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2781 234 CDD RHOD 93 223 - -
Ssu1g2781 234 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC-RELATED 13 234 IPR043186 -
Ssu1g2781 234 SMART rhod_4 89 229 IPR001763 -
Ssu1g2781 234 Pfam Rhodanese-like domain 91 224 IPR001763 -
Ssu1g2781 234 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC 13 234 - -
Ssu1g2781 234 Gene3D - 84 233 IPR036873 -
Ssu1g2781 234 ProSiteProfiles Rhodanese domain profile. 99 232 IPR001763 -
Ssu1g2781 234 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 83 229 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2781 Ssu-Chr1 74180250 74182233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2781 1 229 Sulfurtransferasese or Rhodanese AT4G27700 68.398 2.29e-108 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2781 - - gmx:100788147 424.861