Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2731 ATGAAGGGTGTTGGATCATCGTATCACGATTGGCCCTATTACGCGACACCCCCTTCAAATTTATCAGCTTTTGCGGCGCCGTTTAGTGTCAATCCCTACACTTCCAGTGAGGTTTCGTCTCACTTCATGGATTCAGCTGAATCCGCGGAAACCGTGCCTCCAATTCACTTTCAATCTTACGGGTACGATTTCTTTTCGAGCCCCGTTAGGGAATTGGATTCCAGTGCCCAATTCCCTCATCTGGGTTTGCCTTCTTATTCCACAAGATCGAGTCTCGTTGAAGCCCAACCATACCACCCTTCTTACGTGTCCTCTGCAATCCACGATCACTCTTCTTCGGTGGCACCTTATCGTTGGTCTTCTCTTGGGGACGCTAACAAGTCACCTGAATTAGGGTTTTCTGGTCAAAGTGCTGTTTCGTGGGACCAGTTTCCGGAGTTCAATAGCCGGGGTAAAGGGAAGCAGGTCGGAGTTGGGAGCAGCCTCTCCTCGAAGGAAACAAATGCTGCTGGTTTGGTTGTTTTAGAAAGGATGAACCAGAACCAGAACCTAgGGAATCAAGATGTGAAGGACTCTGCTAATAGTGAGGTTTCGCATATTATTGATTGGGAAAACCACAATGTGCCTGCTAGTGCAAATCATTTACATGATACATCTAGCTGGTGGGGAACTATCAAACCCATGCCAGTTGAATTTTCAGGTACATCTGTTATGCAATCCCCTTCAATGTCTTTAGAAGCTCATCACGAGGCCCCTTTGAAAGTAGTTGCTGATTCAGGGAACAATCACTTGTCAAACACTGGTTCATATGACAAACACTCAAGGCATGGTGATAAACCATCAAGAGTTGATACTGTTTCTTCAATGCCTAGAACAGGGTTGGATACAGATTTGAATATTGACAATATTATAGCAGATGAACTTGTTGGGCacaataatttctataatacaAAGGAGGCTTATCACATGCCTGGTCCTGGAACTGCTGGTTGCTTTGATTCAGGTCATCTCCGTATGCATCTAGGAAGAAATGAACCTTCCTCATCAAACAAAGCAACGATTTCAGACAAAAATGTTTCAAGCGATGTTgttgattatatatttagagGAAGGCATGGATTTCAAAATTCTCATGCAAATATGGATAATTTAAGCTTGAGACTTAGTGCTATTGAAGACATCAATTTTGTTGAGAAATCTTTGGAGGGTGGTGACCGATGCAATCCTGCTGAAGACTCACCTTGCTGGAAGGGAGCTTCTGCTGCGCACTTTTCTCATTTTGAACCTTCTGTGGCTCTGCCTCCAGAATATGtacacaaaaaagaagaaggctTTGGTTCTGTTGTTCAGGACCCTCAGAATTATCTGCTTGGTACtggaaataatatgaaaaaatcacatgaaaatTCAAATGGCTATCAAATGCATACCAAAATTGTCTATCAGGAAACAAGTTCTGCAGGTTCTCCAAGGAAATTTTCAGTAACAAAGTTTGCATCTGAAGATTGCAAGTCAGGTGGTGCTGTGAATGATGGAccttttcaatctgatcctagcTCTAATTATGGGCTTCAATTTCTGGATATCagcaaaatgaaggaaaatagTGTGCCACCTGCCAAGCCAACTGATTGCGAGTCTGGATCTTCTCACACAGAGCATCAAGTTGTAGAGGAAAACAAATTCATGTCTCAAAAACAGCACACTTCGTGCATAGGTGATGCAGATGCTGGATGCAATGCGAATAAATGCTTGGAAAATGGCACATCTCACACTGCAGAACATGCCCTGTCTTCACCTTCTTCGGTAGTAGATACAACTACTGCACCTGAAAATTCAGCTGGGAAAGTATCAACTGAAAAACTGAATGTCCAAACGTTGGTTGATACAATGCAAAATTTATCAGAATTGCTTCTTCATCATTGCTTAAATGATGCCTGTGAATTGAAAGAGCGAGATTGCAATGTCCTTAAAAATGTGATCAGTAATCTTAATACTTGTACTTTAAAAAATGCTGAACAAATTGCCCCAACACAAGAATGTCATTTCAATCAGCCAGAAACATCTAAGTGTGCTGGAGAATCATGTGAGTTTCAACAGAATGCAAGTTTTAAGAGGCCACAGTTAACCAAGATAGGACCAGAGAACTCTAAGGTTGAGTTTGAGAATCCACATGTAGCAGAGGCAAACTTGCATTTCAGGTCTGGGAAACCACATTGGAAGATTTCAGATTCCATTTCCCCAAGGGATGATATGGAAATGACAAAGGCTGATAACATGACTAAGGATCTAAAGAGGATTCTTAGCGAGAATTTCCATGATGATGAAGGAGCAGAGCCTCAGACTGTATTATATAAGAACCTATGGCTTGAAGCTGAAGCTGCACTATGTTCTGTCCATTACAGGGCTCGCTATAATCAAATGAAGATTGAAATGGATAAACACTCTTGCAAGGAAAAAGAGATGGAGAAGCAATCAAAACCTGAGGTTGTTCCGACTTTGAGCCAAAGTCAGAGTTCTGCAACTACAGTGCACAATTATCCAAACCCTGATTCTTCTGCCCTGAAATTGCCTGTCTTGGATGCTACCAATCTAGATGAACTATCTCGTTTGAATTTTTCTACCGACATGAACAAGCCTATTGCAATGACATCTGAAGGAAAAGGTGGTCAAAACCTGGATAACTTCATCGATAATTATACTGTTTCCTGCTCAGATGAGGAGGCTGAAAGAAATGATGAGGCTTTTGTTATGGCCAGATACCAAGTTCTCAAGGCCCGGGATGACCACTCATGCATTGATACTACCGATCTGGAGGAACCATTAGACATAGCAGACGACAGGTCAGGACCTAGAGGGAGGGATAATCAAAACCAAGTTAATATCTGCCAAGATTCTCCCATTCCTGAAAACAACAGGACTGATTATGAGGCATCTGTTGTGGGTAGGTTTCATATTCTGAAATGCCGGGTTGAAGGGTCAAGGTCTATTTCTTCAGAAGGCACACAGTTAGATGGAGTTGGATCTGCTGGCAAAGGAATGGATGACACAACAATTGCAAAAAATGTATCTGAGGGTAAAAGTTTGGACGTCCATGTTGGGTTTTACAGCTATTCATGTAGTATGGCTGAGTTCATTGTAAAGGATGAAGTCAGAAAAGCTGTTACTAAGACTCCTGGAATTGCTGCTGGGCTTGTAAGAATGCATTTTCATGATTGCTTTATTAGGGGGTGTGATGCATCAGTGCTTCTTGATTCCATTCCCTCAAACACTGCAGAGAAAGACTCTCCCGCAAACAAACCAAGTCTCCAAGGGTATGAAGTCATTGATAATGCCAAGGCTAGACTTGAAGCAGTATGCGAAGGAATTGTTTCATGTGCTGACATTGTTGCATTTGCAGCAAGGGATAGTGTGGAGTTAGCTGGAGGGCTTGGTTATGATGTTCCAGCAGGAAGAAGAGATGGCAGAATCTCACTAGCTTCAGATACAAGAACAGAGTTACCTCCTCCAACTTTCAATgtaaaccaactcactcaactCTTTGCAAAGAAGGGATTGACACAAGATGAAATGGTCACCCTTTCAGGAGCGCACACCGTTGGCCGCTCTCATTGCTCCGCTTTCAGCAACAGATTATACAATTTCAGTAGCACTTCAAGCCAGGATCCAAGTTTAGATCCCTCGTATGCAGCACTGCTGAAGCGGCAATGTCCACAAGGCAGCACAAACCCGAACTTAGTGGTTCCAATGGACCCTTCTAGTCCTGGAATTGCAGATGTAGGCTATTATACGGATATATTAGCAAACCGAGGCCTGTTCTCTTCTGATCAGACTCTCCTAACTAATGCTGAAACAGCGAGCCAGGTGAATCAAAATGCCAGGAATCGCTATTTATGGGCAAGCAAATTTGCGGATGCAATGGTGAAGATGGGTCAAATCAGTGTCTTAACAGGCAATGCTGGAGAGATTAGAACAAATTGCAGGGTGGTCAATAGCTAG 3999 0.4146 MKGVGSSYHDWPYYATPPSNLSAFAAPFSVNPYTSSEVSSHFMDSAESAETVPPIHFQSYGYDFFSSPVRELDSSAQFPHLGLPSYSTRSSLVEAQPYHPSYVSSAIHDHSSSVAPYRWSSLGDANKSPELGFSGQSAVSWDQFPEFNSRGKGKQVGVGSSLSSKETNAAGLVVLERMNQNQNLGNQDVKDSANSEVSHIIDWENHNVPASANHLHDTSSWWGTIKPMPVEFSGTSVMQSPSMSLEAHHEAPLKVVADSGNNHLSNTGSYDKHSRHGDKPSRVDTVSSMPRTGLDTDLNIDNIIADELVGHNNFYNTKEAYHMPGPGTAGCFDSGHLRMHLGRNEPSSSNKATISDKNVSSDVVDYIFRGRHGFQNSHANMDNLSLRLSAIEDINFVEKSLEGGDRCNPAEDSPCWKGASAAHFSHFEPSVALPPEYVHKKEEGFGSVVQDPQNYLLGTGNNMKKSHENSNGYQMHTKIVYQETSSAGSPRKFSVTKFASEDCKSGGAVNDGPFQSDPSSNYGLQFLDISKMKENSVPPAKPTDCESGSSHTEHQVVEENKFMSQKQHTSCIGDADAGCNANKCLENGTSHTAEHALSSPSSVVDTTTAPENSAGKVSTEKLNVQTLVDTMQNLSELLLHHCLNDACELKERDCNVLKNVISNLNTCTLKNAEQIAPTQECHFNQPETSKCAGESCEFQQNASFKRPQLTKIGPENSKVEFENPHVAEANLHFRSGKPHWKISDSISPRDDMEMTKADNMTKDLKRILSENFHDDEGAEPQTVLYKNLWLEAEAALCSVHYRARYNQMKIEMDKHSCKEKEMEKQSKPEVVPTLSQSQSSATTVHNYPNPDSSALKLPVLDATNLDELSRLNFSTDMNKPIAMTSEGKGGQNLDNFIDNYTVSCSDEEAERNDEAFVMARYQVLKARDDHSCIDTTDLEEPLDIADDRSGPRGRDNQNQVNICQDSPIPENNRTDYEASVVGRFHILKCRVEGSRSISSEGTQLDGVGSAGKGMDDTTIAKNVSEGKSLDVHVGFYSYSCSMAEFIVKDEVRKAVTKTPGIAAGLVRMHFHDCFIRGCDASVLLDSIPSNTAEKDSPANKPSLQGYEVIDNAKARLEAVCEGIVSCADIVAFAARDSVELAGGLGYDVPAGRRDGRISLASDTRTELPPPTFNVNQLTQLFAKKGLTQDEMVTLSGAHTVGRSHCSAFSNRLYNFSSTSSQDPSLDPSYAALLKRQCPQGSTNPNLVVPMDPSSPGIADVGYYTDILANRGLFSSDQTLLTNAETASQVNQNARNRYLWASKFADAMVKMGQISVLTGNAGEIRTNCRVVNS 1332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2731 1332 Coils Coil 805 825 - -
Ssu1g2731 1332 CDD secretory_peroxidase 1032 1330 IPR033905 GO:0004601|GO:0042744
Ssu1g2731 1332 MobiDBLite consensus disorder prediction 954 973 - -
Ssu1g2731 1332 MobiDBLite consensus disorder prediction 260 290 - -
Ssu1g2731 1332 PANTHER OS08G0157800 PROTEIN 5 1034 - -
Ssu1g2731 1332 MobiDBLite consensus disorder prediction 595 615 - -
Ssu1g2731 1332 Gene3D Peroxidase, domain 2 1168 1310 - -
Ssu1g2731 1332 PANTHER OS08G0157800 PROTEIN 5 1034 - -
Ssu1g2731 1332 ProSitePatterns Peroxidases proximal heme-ligand signature. 1190 1200 IPR019793 -
Ssu1g2731 1332 MobiDBLite consensus disorder prediction 941 973 - -
Ssu1g2731 1332 PRINTS Haem peroxidase superfamily signature 1124 1141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g2731 1332 PRINTS Haem peroxidase superfamily signature 1251 1266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g2731 1332 PRINTS Haem peroxidase superfamily signature 1142 1154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g2731 1332 PRINTS Haem peroxidase superfamily signature 1062 1076 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g2731 1332 PRINTS Haem peroxidase superfamily signature 1190 1205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g2731 1332 SUPERFAMILY Heme-dependent peroxidases 1032 1331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu1g2731 1332 Pfam Peroxidase 1047 1294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g2731 1332 ProSitePatterns Peroxidases active site signature. 1062 1073 IPR019794 GO:0004601
Ssu1g2731 1332 MobiDBLite consensus disorder prediction 823 850 - -
Ssu1g2731 1332 ProSiteProfiles Plant heme peroxidase family profile. 1030 1331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g2731 1332 Gene3D - 1034 1331 - -
Ssu1g2731 1332 MobiDBLite consensus disorder prediction 829 850 - -
Ssu1g2731 1332 PRINTS Plant peroxidase signature 1040 1059 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g2731 1332 PRINTS Plant peroxidase signature 1249 1264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g2731 1332 PRINTS Plant peroxidase signature 1064 1084 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g2731 1332 PRINTS Plant peroxidase signature 1123 1133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g2731 1332 PRINTS Plant peroxidase signature 1305 1318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g2731 1332 PRINTS Plant peroxidase signature 1142 1157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g2731 1332 PRINTS Plant peroxidase signature 1265 1282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g2731 1332 PRINTS Plant peroxidase signature 1104 1117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g2731 1332 PRINTS Plant peroxidase signature 1189 1201 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2731 Ssu-Chr1 73379272 73388261 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2731 1031 1332 Peroxidase AT1G05260 50.329 1.13e-89 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2731 - K00430 gmx:100807937 1540.4