Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2724 ATGTCAAAGGATAGGCAAGTAGCTTCTAAATCTAGTAATCGTGCAAAACTGATTTATGTGGTGATTGTCAAATTGATTATTACAGTCCGGACCCATGGCACTGGTGATTATGAACTTGTGGCATATTTCATTGGTTTTGGTTGTGCTGAGAAGAAAAGTTGGTGTGGTCCATGTGGACACCTTCATTTTGGTAACGACGGAAGCTACAGATTCATCAAAGAAATCTACAAATCAAGTTGCTTGCAGTGGCCTGTTGGGATAACACTGGCCATGGGACTGTTCTATTATGGTCTGCGAGAAACATCAGCTACTTACTCTGTCAATTTTCTCAACTTGGTTCCTATTTTCACTTTCATTGTCTCTATTATATTGAGAATGGAGAGGCTGAGGCTTCACACATGGACGAGTAAAGTGAAGACAATGGGGGCAATTTTGTGTGTTGGGGGAGCATTAACAACAAGCCTATACAAGGGCAAGGAATTCTACATTGTTCAAAGTAGTCATCACACTCACAGTACAGTTGAGGCATCCAAAACCAACATGCTTCGTGGCACTCTCTTTTTGGTTGGCAGCTGCTTGTCATACACAGCTTGGTTCATTGTTCAAGTTAAGTTGCTTGAAATATTTCCATTCAAATATTGGGGAACAATGCTTACATGCATCATAGCTTCAATTCAAGCGACAATAGTAGGAATATGCTTAGATTGCAGAAAAGTTACTTGGAGTTTAAAGTGGAATCTACAACTTATGACAATAATATACTCGGGAGCACTGGCTACGGCTGCTACATTTTGCTTAATTTATTGGGCAATTGCAATCAAAGGACCTACTTATCCCACAATGTTTAATCCATTGGCTCTTATTTTTGTGGCCATATCGGAAGCTATCTTATTGGGTGAACCAATCAGACTTGGCATGTTGCTGGGCATAACTTTGATCTTAATGGGATTGTACTCCTTTTTGTGGGGTAAAGGAAAGGAGACACAATGTATGCTTCAAGCATCTGGAGAAGTTTTAACAAGCATGACAGCTGAGTCTGCTGGAGTGCATTCCACAGCCTTAGTGGTACCAAGTTTTTCACCTAGTAATGCAGTTCTTGGAGTCGAAAAGACCGACAGAAACTGA 1125 0.4062 MSKDRQVASKSSNRAKLIYVVIVKLIITVRTHGTGDYELVAYFIGFGCAEKKSWCGPCGHLHFGNDGSYRFIKEIYKSSCLQWPVGITLAMGLFYYGLRETSATYSVNFLNLVPIFTFIVSIILRMERLRLHTWTSKVKTMGAILCVGGALTTSLYKGKEFYIVQSSHHTHSTVEASKTNMLRGTLFLVGSCLSYTAWFIVQVKLLEIFPFKYWGTMLTCIIASIQATIVGICLDCRKVTWSLKWNLQLMTIIYSGALATAATFCLIYWAIAIKGPTYPTMFNPLALIFVAISEAILLGEPIRLGMLLGITLILMGLYSFLWGKGKETQCMLQASGEVLTSMTAESAGVHSTALVVPSFSPSNAVLGVEKTDRN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2724 374 PANTHER WAT1-RELATED PROTEIN 85 337 - -
Ssu1g2724 374 PANTHER WAT1-RELATED PROTEIN 85 337 IPR030184 GO:0016021|GO:0022857
Ssu1g2724 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 326 - -
Ssu1g2724 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 85 155 - -
Ssu1g2724 374 Pfam EamA-like transporter family 85 143 IPR000620 GO:0016020|GO:0016021
Ssu1g2724 374 Pfam EamA-like transporter family 183 320 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2724 Ssu-Chr1 73241465 73257476 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2724 93 324 Nodulin-like Gene Family AT1G09380 34.310 1.96e-43 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2724 - - gmx:100780316 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2584 6 60768365 60776377 Ssu1g2724 1 73241465 73257476 PCT