Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2701 ATGGAGGTCTTTCTGGCAATGAAACTGGCTTCTTCAGTTGCTGTTGTGGGGATTCTAAGCTGGATACTTTATGTGTATGGTAATTTGTGGCATAAGTCCCAAAGGGTGAGAAGGAGGCTCCAAATGCAAGGCATAAAAGGGCCTCCACCTTCTTTTCTACATGGAAATCTACCTGATATGCAGAGAATTCAATCTCAGGCCAGCCTAGCCATAGGTTCCACCTCCAACCATTCTGATCAGTTTCTAGCACATGACTACACCGCAACCCTCTTCCCCTATTTTGAACACTGGAGGAAACAATACGGTCTACTGTACACTTACTCCACAGGGATGAAGCAACACCTGTATGTGAACCAACCGGATCTAGTGAGAGAAATGAATCAATGTATCACTTTGGATTTGGGTAAGCCTTCTTATATAACAAACAAACTTGCACCTATGCTTGGCAATGGCATTTTGAGAGCCAACGGGCTTAGTTGGGCACAACAGAGGAAACTTGTTGCAGCTGAGTTCTTCATGGACAAAGTTAAGGGTATGGTGGGCCTAATGATAGAGTCAGCGCAGCCATTACTACTAAAATGGGAGCAATTTATTGAGAGTCAAGGAGGTGCCACAGCAGAAGTTAAAGTGGATGCAGATTTGAGGGGCTTCTCAGCTGATGTTATTTCAAGGGTTTGCTTTGGTCATTCTTATTCCAAGGGAAAGGAAGTTTTCTCAAAGCTTAGAAGCATACAGAAGGCTATGTCCAAGCAAGGTGGCTTCCTCTTTGGGCTCAGCGGTTTCCGTGACAAACTGAATTTCTCGTCAAAGAAGCAAAACGAGATTGCGCGTTTGGAGAGAGAGATAGAGTCACTGATCTGGGAGTTGGTGGAGGAACGCAAGCGGGAATGCTCAGAGACATCCTCTTCAGAGAAGGATTTGATGCAGTTACTGTTGGAAGCAGCCATGACTGATCAAAGTCTGGGGAAGGACTTTTCCAAGCGATTCATTGTGGATAACTGCAAAAACATATACTTTGCTGGCCATGAAACCACTGCTGTTGCGGCCTCTTGGTGTTTAATGCTTCTTGCTTTACACCCAGAATGGCAAACTCGTATAAGGACTGAGGTGGCTGAACTTTGCCCCAATGGGATACCGGACGCAGATTCTGTCCCTCTGTTGAAAACGGTGGCTATGGTGATTAAAGAAGTGCTACGTTTATACCCACCAGCAGCTTTTGTGTCAAGGGAGGCATATGAAGATATCCAAATTGGAAACCTCAATGTTCCTAAAGGTGTTTGCTTATGGACTCTGATCTCGACATTGCAAAGAGATCCTGAAATTTGGGGACTAGATGCGAATGAGTTTAAACCACAAAGGTTCAGTGAGGGTGTCTCTAAGGCTTGCAAGTTTCCACATGCTTATGTGCCATTTGGATTGGGTACTCGCTTGTGCTTAGGAAAGAACTTTGCAATGGTTCAATTGAAGGTTGTGCTAGCCCTTATCATCTCTAAGTTTAGCTTCTCTCTGTCTCCTAGTTATAGGCATTCTCCGGCCTATAGAATGATTGTAGAACCGGGACATGGTGTATATATTCTCATTCAGAAGATTTGA 1593 0.4444 MEVFLAMKLASSVAVVGILSWILYVYGNLWHKSQRVRRRLQMQGIKGPPPSFLHGNLPDMQRIQSQASLAIGSTSNHSDQFLAHDYTATLFPYFEHWRKQYGLLYTYSTGMKQHLYVNQPDLVREMNQCITLDLGKPSYITNKLAPMLGNGILRANGLSWAQQRKLVAAEFFMDKVKGMVGLMIESAQPLLLKWEQFIESQGGATAEVKVDADLRGFSADVISRVCFGHSYSKGKEVFSKLRSIQKAMSKQGGFLFGLSGFRDKLNFSSKKQNEIARLEREIESLIWELVEERKRECSETSSSEKDLMQLLLEAAMTDQSLGKDFSKRFIVDNCKNIYFAGHETTAVAASWCLMLLALHPEWQTRIRTEVAELCPNGIPDADSVPLLKTVAMVIKEVLRLYPPAAFVSREAYEDIQIGNLNVPKGVCLWTLISTLQRDPEIWGLDANEFKPQRFSEGVSKACKFPHAYVPFGLGTRLCLGKNFAMVQLKVVLALIISKFSFSLSPSYRHSPAYRMIVEPGHGVYILIQKI 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2701 530 PRINTS P450 superfamily signature 478 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2701 530 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2701 530 PRINTS P450 superfamily signature 469 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2701 530 PRINTS P450 superfamily signature 340 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2701 530 PRINTS E-class P450 group I signature 478 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2701 530 PRINTS E-class P450 group I signature 468 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2701 530 PRINTS E-class P450 group I signature 217 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2701 530 PRINTS E-class P450 group I signature 98 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2701 530 PRINTS E-class P450 group I signature 329 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2701 530 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2701 530 PANTHER CYTOCHROME P450 FAMILY MEMBER 6 525 - -
Ssu1g2701 530 Pfam Cytochrome P450 88 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2701 530 Gene3D Cytochrome P450 29 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g2701 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 471 480 IPR017972 GO:0005506|GO:0016705
Ssu1g2701 530 PANTHER CYTOCHROME P450 714A1-RELATED 6 525 - -
Ssu1g2701 530 Coils Coil 268 295 - -
Ssu1g2701 530 SUPERFAMILY Cytochrome P450 85 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2701 Ssu-Chr1 72951297 72959997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2701 122 527 Cytochrome P450 AT5G24900 57.178 8.03e-177 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2701 K20661 - gmx:100815776 998.423