Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2700 ATGGTGGCAATGGAAGTCGCagcacacacacagacacagtTACAGTTAGAGAAACACGTGATAGAGGGTTTTGGCTCAAAATCCATGGAATTGAAATGGGTAAGGCGAAGAACCAGCGAAAGCTCACAGCTCGAGAAGACGAAGCCTTCGAGACCGCTCTTCCCGATTTACATTTCCACCGACCCACGCCACGTGGACCCGCACCGTCTCCGAGACCTCTTCGCCGATTGCAATCACTCCACTCATCGATTCCCTACCCGACCCGAACCCGTGGATATCCGCAAGCTCCGCATTGCTCTGTCTCACAGTGCCGTGCTTGTCTCTGTCTTCTGCAACCCCCAACATGTAAACGCCGTTCCCCATCACAGTTCCATGGTAACGTCTCCAATCACGGATTTCTTCACGCCGGTTTCTCCTTCCCGCGATCAATTGGTCGGCTTTGGCCGTGCCGTTTCCGATTATGGCCTCACCGCTTCTATTTACGATGTCATGGTTATTCCTTCCCTGCAGAGAATGGGAATTGGGAAgatgatagttaaaaaaattgtgagAATGCTTACAAATAGAGACGTGTATGACATAGCAGCCCTTTGCTCGGAGAATGAAAGCTTATTTTTCAAGGCGTGTGGATTTGGATACGACATTTTGGGTTCTACTACCATGATGTACGTGAGAACTGCTCCGCTAACAACCCCGGAAGGTGAATAG 708 0.476 MVAMEVAAHTQTQLQLEKHVIEGFGSKSMELKWVRRRTSESSQLEKTKPSRPLFPIYISTDPRHVDPHRLRDLFADCNHSTHRFPTRPEPVDIRKLRIALSHSAVLVSVFCNPQHVNAVPHHSSMVTSPITDFFTPVSPSRDQLVGFGRAVSDYGLTASIYDVMVIPSLQRMGIGKMIVKKIVRMLTNRDVYDIAALCSENESLFFKACGFGYDILGSTTMMYVRTAPLTTPEGE 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2700 235 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 140 211 IPR016181 -
Ssu1g2700 235 Gene3D - 54 214 - -
Ssu1g2700 235 CDD NAT_SF 142 191 - -
Ssu1g2700 235 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 26 230 IPR039143 GO:0004343|GO:0006048
Ssu1g2700 235 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 91 235 IPR000182 GO:0016407
Ssu1g2700 235 Pfam Acetyltransferase (GNAT) family 141 211 IPR000182 GO:0016407
Ssu1g2700 235 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 26 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2700 Ssu-Chr1 72945370 72947102 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Ssu1g2700 Acetyltransf_1 6.9e-07 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2700 - - gmx:100792685 393.275