Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2687 ATGGGAGGAGGAAGGAAGAATTTGAAGAGGGCAAAAGAGGAAAAACATGTAACCCTTCAAGATGGGCAAAGCATCATGCAGGTGGTGTCTCTTCGAGGCTCCAATCTCATTGAGGTCATGGATGCACATGGCAACAAATCGCTAGCTCTATTCCCTGCTAAATTTCAGAGAAGCATGTGGATTAAACGAGGGAGCTTCGTTGTTGTTGATGAAAGTGGAAAGGAAAAGGCTCTTGAATCGGGTAGCAAGGTTGCATGTCTTGTTTCTCAAGTTCTTTTCTATGAACAAGTTCGAGAACTACAGAAATCTCCAGAATGGcctgaaaattttaaatctgcAATGGTAGATGATTCAAATGAAAGAACTGCTTCCCAACAAGAGAATGAGATGGAGGGGAGTGATGATGATGGACTACCTCCATTGGAAGCCAATACAAACAGGATCAGACCTTTTGAGTTGCAAGCTGATGAAGATTCAGAATCCAGTTCAGATACAGATGATTGA 504 0.4107 MGGGRKNLKRAKEEKHVTLQDGQSIMQVVSLRGSNLIEVMDAHGNKSLALFPAKFQRSMWIKRGSFVVVDESGKEKALESGSKVACLVSQVLFYEQVRELQKSPEWPENFKSAMVDDSNERTASQQENEMEGSDDDGLPPLEANTNRIRPFELQADEDSESSSDTDD 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2687 167 MobiDBLite consensus disorder prediction 105 167 - -
Ssu1g2687 167 Gene3D - 1 138 IPR012340 -
Ssu1g2687 167 PANTHER TRANSLATION INITIATION FACTOR-RELATED 1 163 IPR039294 -
Ssu1g2687 167 SMART eIF1neu4 18 107 IPR001253 GO:0003743|GO:0006413
Ssu1g2687 167 SUPERFAMILY Nucleic acid-binding proteins 2 136 IPR012340 -
Ssu1g2687 167 ProSiteProfiles S1 domain IF1 type profile. 4 84 IPR006196 GO:0003723|GO:0003743|GO:0006413
Ssu1g2687 167 Pfam Translation initiation factor 1A / IF-1 22 74 IPR006196 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2687 Ssu-Chr1 72762201 72763919 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2687 2 69 Eukaryotic Initiation Factors Gene Family AT2G04520 33.784 6.48e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2687 K15025 - gmx:100306612 268.855