Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2664 ATGGATCCTGAATCCAGGAAGTGTTGGGACACCTCAAAGAAGGACTCTTGGAAGACTATTCTGCTCTTGGCCTACCAAAGCCTTGGTGTGGTATATGGGGACTTGAGCATTTCTCCATTGTATGTCTACACGAGCACATTTGCGGAAGATATTGAACATTCAGAGACCAATGAAGAGATTTTTGGCGCCCTTTCTTTTGTCTTCTGGACTCTGACATTGGTGCCATTATTCAAATACGTTTTTGTGGTTCTTCGAGCTGATGATAATGGGGAGGGCGGCACATTTGCTCTATATTCCTTGATTTGTAGGCATGCTAAAGTTAGTCTCCTACCAAATCGACAACATGCTGATGAAGCGCTTTCTACATATAAGATGGAGGAGCCTCCAGAGAAAGATACTTCTAGAGTGAAGATGGTGCTTGAGAAATATAAGGCCTTGCATACAGCTCTGCTAATTGTGGTTCTTCTTGGCACTTGTATGGTAATAGGGGATGGACTGCTTACCCCAGCTATTTCTGTTTTCTCGGCAGTATCTGGTCTTGAGGTATCTATGTCCAAGAAACACCACCAGTATGCTGTGATTCCCATCACTTGCTTCATACTGGTGTGTTTGTTTGCACTCCAACACTATGGTACACATAGGGTGGGATTCCTTTTTGCTCCAGTTGTGTTGGCATGGCTGTTGTGCATAAGCACACTTggtttgtataatatatttaaatggaATCCACACGTATATAAAGCTCTTTCACCATATTACATGTTCAAGTTCTTGAAGAAGACCAGGATAAGTGGTTGGATGTCTTTGGGTGGAATATTGCTGTGCATAACAGGCTCAGAAGCTATGTTTGCTGATCTTGGCCATTTCTCATATGTGGCCATTCAGATTGCATTCACCTTTCTGGTATATCCTGCACTTATATTGGCATATATGGGTCAAGCTGCTTATTTGTCAGATCATCATGATTCCGAACTCCAAATCAGTTTCTATGTCTCAGTTCCAGAAAGTGTGAGGTGGCCAGTGCTTATCTTAGCTATTCTAGCCTCTGTTGTGGGAAGCCAAGCAATCATCAGCGGAACATTTTCTATCATAAACCAGAGCCAATCTCTAGGTTGCTTCCCCAGAGTTAAGGTTGTTCATACATCTGATAAGATACATGGTCAGGTCTACATCCCTGAAATTAATTGGCTACTCATGATCCTCTGTATTGCTGTGACCATTGGCTTTAGGGACACAAAACACATGGGAAATGCTTCAGGGTTAGCAGTGATGACCGTGATGCTGGTAACAACATGCCTTACTTCCTTAGTGATCATAGTTTGTTGGCATAAACCCCCTATAGTAGCCCTTTGTTTCCTGTTGTTTTTCGGCTCTATTGAACTGCTATATTTCTCAGCTTCACTGACAAAGTTTTGTGAGGGTGCCTGGTTACCTATCCTGCTGGCTCTCTTCCTCATGATTATAATGTTCCTTTGGCACTATGCAACCATCAGAAAATATGAATATGACCTTCACAACAAGGTGTCACTAGATTGGCTTCTAGCCTTAGGTCCAAGCTTGGGAATTGCTAGAGTCCCAGGAATAGGCCTAGTATTCACTGACCTCACCACTGGCATCCCAGCAAACTTTTCCCGCTTTGTCACCAACCTCCCTGCATATCACCGCATccttgtttttgtgtgtgtgaagtCAGTGCCTGTCCCTCACGTCCCTGCTGCTGAGAGGTATCTTGTAGGCCGTGTAGGACCTCCTGCTCATCGGTCCTACAGGTGTATAGTCAGATATGGATATCGCGATGTTCATCAAGATGTTGACTCCTTTGAGTCTGAACTAGTAGCAAGGCTTGCTGATTTCATCCAATATGATTGGTACCGGACTCGGAGGAGTAGCATGAGCATTGAGGATGATGCTTCAAACTCTAATGAATCATCAAGTCACAGGCTAACTGTAATTGGAACAACTGGTTTCTCCATCCAACCAGGATATGGGAGTGGTGTGGAGAGTGTGCAGCAAGCAAGTGTATCTGCTGGGTTCCCTACTGTTCAAAGTGTGACTGATGTTATTGAGATGGAGCCAATGGGTGTGACTGAGAGGAGAGTGAGGTTTGCTATTGATGATGAGCCTGAAAGTGATGCAAGGTCTGAGGTAGGAGTGCAAATGCAGGAAGAGCTAGAAGATCTTTATGCTGCTCAAGAAGCTGGGATTGCCTTCATTCTTGGACATTCTCATGTAAGAGCAAAGCAAGGCTCATCTGTCCTAAAGAAATTGGCACTTAACTACGGCTACAATTTCTTGAGAAGGAATTGTCGAGGCCCGGATGTGGCACTTAAGGTTCCCCCAGTTTCTCTTTTGGAGGTTGGCATGGTTTATATTGTGTAG 2379 0.4346 MDPESRKCWDTSKKDSWKTILLLAYQSLGVVYGDLSISPLYVYTSTFAEDIEHSETNEEIFGALSFVFWTLTLVPLFKYVFVVLRADDNGEGGTFALYSLICRHAKVSLLPNRQHADEALSTYKMEEPPEKDTSRVKMVLEKYKALHTALLIVVLLGTCMVIGDGLLTPAISVFSAVSGLEVSMSKKHHQYAVIPITCFILVCLFALQHYGTHRVGFLFAPVVLAWLLCISTLGLYNIFKWNPHVYKALSPYYMFKFLKKTRISGWMSLGGILLCITGSEAMFADLGHFSYVAIQIAFTFLVYPALILAYMGQAAYLSDHHDSELQISFYVSVPESVRWPVLILAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQVYIPEINWLLMILCIAVTIGFRDTKHMGNASGLAVMTVMLVTTCLTSLVIIVCWHKPPIVALCFLLFFGSIELLYFSASLTKFCEGAWLPILLALFLMIIMFLWHYATIRKYEYDLHNKVSLDWLLALGPSLGIARVPGIGLVFTDLTTGIPANFSRFVTNLPAYHRILVFVCVKSVPVPHVPAAERYLVGRVGPPAHRSYRCIVRYGYRDVHQDVDSFESELVARLADFIQYDWYRTRRSSMSIEDDASNSNESSSHRLTVIGTTGFSIQPGYGSGVESVQQASVSAGFPTVQSVTDVIEMEPMGVTERRVRFAIDDEPESDARSEVGVQMQEELEDLYAAQEAGIAFILGHSHVRAKQGSSVLKKLALNYGYNFLRRNCRGPDVALKVPPVSLLEVGMVYIV 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2664 792 Pfam K+ potassium transporter 25 599 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu1g2664 792 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 792 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu1g2664 792 TIGRFAM kup: potassium uptake protein 23 791 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu1g2664 792 PANTHER POTASSIUM TRANSPORTER 2 1 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2664 Ssu-Chr1 72359728 72363666 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2664 1 792 Inorganic Solute Cotransporters AT2G40540 77.764 0.0 1266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2664 K03549 - gmx:100806122 1509.2