Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2645 ATGGCTTCGTTTTGTTCTAGATTAACCATCAGTTTGGCTCTGTTTGTCCTCATATTGGGGAGTGCCAATGCACAACTTTCTACTAGTTTCTACTACAGTTCCTGTCCAAAACTCCTCTCCACTGTGAAATCCACAGTGCAATCTGCCATATCAAAGGAGGCCCGCATGGGTGCTTCTCTCCTCCGCTTGTTCTTCCACGATTGCTTTGTCAATGGATGTGATGGTTCAATTCTATTGGACGACACATCAAGCTTCACCGGGGAGAAGAATGCAAACCCCAACAGGAACTCTGCTCGGGGATTCGATGTCATCGACAACATCAAATCAGCCGTGGAGAAAGTGTGCCCGGGAGTTGTCTCCTGCGCAGATATCCTTGCCATCACTGCCAGAGACTCCGTTCAGATCCTTGGAGGCCCTACTTGGGATGTTAAACTTGGAAGAAGAGACGCTAAGACGGCTAGCCTGTCTGCTGCTAACAATGGCATCCCTCCACCCACCTCAAACCTTAACCAACTCATCTCCAGATTCAGCGCCCTTGGCCTTTCCACCAAGGACTTGGTCGCCTTGTCCGGTGGTCACACAATTGGACAAGCAAGGTGCACAAATTTCAGGGCACGCATCTACAACGAGACCAACATAGATAGCTCATTTGCAAAAACTAGGCAATCAAGCTGCCCCAGAGCATCAGGATCAGGGGACAACAATCTGGCACCCCTTGATCTTCAGACTCCCACCACCTTTGACAACTACTACTTCAAGAACCTGGTTCAGAAAAAGGGTCTCCTTCACTCTGATCAGCAACTATTCAATGGTGGGTCCACCGACTCCATAGTGCGTGGCTACAGCACTAACCCAAGCTCCTTTTCCTCTGATTTCGTCTCCGCCATGATCAAGATGGGAGACATTAGTCCTCTCACTGGCTCCAGCGGAGAAATCAGGAAGAATTGTAGAAGGGTTAACTAA 963 0.4912 MASFCSRLTISLALFVLILGSANAQLSTSFYYSSCPKLLSTVKSTVQSAISKEARMGASLLRLFFHDCFVNGCDGSILLDDTSSFTGEKNANPNRNSARGFDVIDNIKSAVEKVCPGVVSCADILAITARDSVQILGGPTWDVKLGRRDAKTASLSAANNGIPPPTSNLNQLISRFSALGLSTKDLVALSGGHTIGQARCTNFRARIYNETNIDSSFAKTRQSSCPRASGSGDNNLAPLDLQTPTTFDNYYFKNLVQKKGLLHSDQQLFNGGSTDSIVRGYSTNPSSFSSDFVSAMIKMGDISPLTGSSGEIRKNCRRVN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2645 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Ssu1g2645 320 Pfam Peroxidase 42 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g2645 320 Gene3D - 30 317 - -
Ssu1g2645 320 Gene3D Peroxidase, domain 2 163 299 - -
Ssu1g2645 320 PANTHER PEROXIDASE 5 320 - -
Ssu1g2645 320 PANTHER PEROXIDASE 72-RELATED 5 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g2645 320 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g2645 320 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g2645 320 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g2645 320 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g2645 320 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g2645 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g2645 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g2645 320 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g2645 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g2645 320 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g2645 320 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g2645 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g2645 320 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g2645 320 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g2645 320 CDD secretory_peroxidase 25 319 IPR033905 GO:0004601|GO:0042744
Ssu1g2645 320 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Ssu1g2645 320 SUPERFAMILY Heme-dependent peroxidases 25 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu1g2645 320 ProSiteProfiles Plant heme peroxidase family profile. 25 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2645 Ssu-Chr1 71920168 71921980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2645 24 320 Peroxidase AT5G05340 79.125 4.34e-179 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2645 K00430 - gmx:100803637 591.267